YQE_03219 (Dendroctonus ponderosae)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 YQE_03219 T166289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY

RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.869 0.869
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV

BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.869 0.869
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.800 0.800
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN

NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.800 0.800
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.800 0.800
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN

NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.800 0.800
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN

NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.800 0.800
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN

NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.800 0.800
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN

NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.800 0.800
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB

VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.800 0.800
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN

NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.800 0.800
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN

NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.800 0.800
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV

BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.800 0.800
RBPJ
M10413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.800 0.800
RBPJ
M10414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN80360 CSL 63 194

Links

Other CSL family TFs
Other Dendroctonus ponderosae TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sjc_0053270 Schistosoma japonicum Sjc_0053270 N 0.000
TASK_0000564101 Taenia asiatica TASK_0000564101 N 0.000
T265_03639 Opisthorchis viverrini T265_03639 N 0.000
SSLN_0000969901 Schistocephalus solidus SSLN_0000969901 N 0.000
SROB_0000697901 Schistosoma rodhaini SROB_0000697901 N 0.000
SMTD_0000192201 Schistosoma mattheei SMTD_0000192201 N 0.000
SMRZ_0001156201 Schistosoma margrebowiei SMRZ_0001156201 N 0.000
SCUD_0001514801 Schistosoma curassoni SCUD_0001514801 N 0.000
HDID_0000954601 Hymenolepis diminuta HDID_0000954601 N 0.000
EmuJ_000193400 Echinococcus multilocularis EmuJ_000193400 N 0.000
ECANG7_06037 Echinococcus canadensis ECANG7_06037 N 0.000
csin101762 Clonorchis sinensis csin101762 N 0.000
A_04337 Schistosoma haematobium A_04337 N 0.000
TsM_000240400 Taenia solium TsM_000240400 N 0.000