CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000005399
(
Latimeria chalumnae
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSLACG00000005399
T167094_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SATB1
M10420_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SATB1_Q3
0.950
0.950
SATB1
M10421_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SATB1_Q5_01
0.950
0.950
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000006082
CUT
367
446
SSNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQ
ENSLACP00000006082
CUT
490
569
NSNLSINASVYDEIQQEMKRAKVSQALFAKVAASKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLPQVERDAIYE
ENSLACP00000006082
Homeodomain
630
687
PRPRTKISVESLGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKH
ENSLACP00000006083
CUT
368
447
SSNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQ
ENSLACP00000006083
CUT
491
570
NSNLSINASVYDEIQQEMKRAKVSQALFAKVAASKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLPQVERDAIYE
ENSLACP00000006083
Homeodomain
674
731
PRPRTKISVESLGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKH
Links
Other
CUT,Homeodomain
family TFs
Other
Latimeria chalumnae
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy