Onecut1 (Mus musculus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		ENSMUSG00000043013 T167158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Onecut1
M09026_2.00		 Mus musculus
NBBATTGATYN
NRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A		 (Direct) (Direct)
Onecut1
M09520_2.00		 Mus musculus
NRATCRATMN
NKATYGATYN		 Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ONECUT1
M02943_2.00 		Homo sapiens
DDTATYGATTTTHN
NDAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT1_1 		1.000 1.000
ONECUT1
M02944_2.00 		Homo sapiens
DDTATYGATTTTHN
NDAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT1_2 		1.000 1.000
ONECUT1
M03715_2.00 		Homo sapiens
HRATCGATAHH
DDTATCGATYD		 SELEX
Nitta et al.(2015)
ONECUT1_1 		1.000 1.000
ONECUT1
M04673_2.00 		Homo sapiens
NNATCGATYN
NRATCGATNN		 SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX 		1.000 1.000
ONECUT1
M04675_2.00 		Homo sapiens
NNCGATCGATAN
NTATCGATCGNN		 SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX 		1.000 1.000
ONECUT1
M09022_2.00 		Homo sapiens
NBBATTGATYN
NRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B 		1.000 1.000
ONECUT1
M10418_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF6_Q4 		1.000 1.000
ONECUT1
M10419_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF6_Q6_01 		1.000 1.000
ONECUT1
M04674_2.00 		Homo sapiens
NTATTGATYN
NRATCAATAN		 SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX 		1.000 1.000
ONECUT1
M04676_2.00 		Homo sapiens
RYSRATCAATAM
KTATTGATYSRY		 SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX 		1.000 1.000
ONECUT2
M02942_2.00 		Homo sapiens
DDTATYGATTTTYN
NRAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT2_1 		0.948 0.948
ONECUT2
M03714_2.00 		Homo sapiens
NDDTATCGATYBNN
NNVRATCGATAHHN		 SELEX
Nitta et al.(2015)
ONECUT2_1 		0.948 0.948
ONECUT2
M04667_2.00 		Homo sapiens
NNATYGATYN
NRATCRATNN		 SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX 		0.948 0.948
ONECUT2
M04669_2.00 		Homo sapiens
NNSGATCGATAH
DTATCGATCSNN		 SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1 		0.948 0.948
ONECUT2
M04670_2.00 		Homo sapiens
NKATYGATYDN
NHRATCRATMN		 SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2 		0.948 0.948
ONECUT2
M10417_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OC2_Q3 		0.948 0.948
ONECUT2
M04668_2.00 		Homo sapiens
DTATTGATYN
NRATCAATAH		 SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX 		0.948 0.948
ONECUT2
M04671_2.00 		Homo sapiens
ACSGATCAATAM
KTATTGATCSGT		 SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1 		0.948 0.948
ONECUT2
M04672_2.00 		Homo sapiens
DTATTGATTDN
NHAATCAATAH		 SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2 		0.948 0.948
ONECUT3
M02945_2.00 		Homo sapiens
DWTATYGATTTTYN
NRAAAATCRATAWH		 SELEX
Jolma et al.(2013)
ONECUT3_1 		0.918 0.918
ONECUT3
M04677_2.00 		Homo sapiens
NNATYGATYN
NRATCRATNN		 SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX 		0.918 0.918
ONECUT3
M04678_2.00 		Homo sapiens
NTATTGATYN
NRATCAATAN		 SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX 		0.918 0.918
onecut
M03716_2.00 		Drosophila melanogaster
NNVRATCRATAHNN
NNDTATYGATYBNN		 SELEX
Nitta et al.(2015)
onecut_1 		0.881 0.881
onecut
M03717_2.00 		Drosophila melanogaster
NNTATYGATTWNN
NNWAATCRATANN		 SELEX
Nitta et al.(2015)
onecut_2 		0.881 0.881
onecut
M06472_2.00 		Drosophila melanogaster
HAATCAA
TTGATTD		 B1H
Mathelier et al.(2014)
MA0235.1 		0.881 0.881
ceh-48
M01905_2.00 		Caenorhabditis elegans
NNATYGRNN
NNYCRATNN		 PBM
Weirauch et al.(2014)
pTH8982 		0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000058020 CUT 288 366
ENSMUSP00000058020 Homeodomain 386 440

Links

Other CUT,Homeodomain family TFs
Other Mus musculus TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI008613 Acyrthosiphon pisum ACYPI008613 I 0.000
AAEL008337 Aedes aegypti AAEL008337 I 0.000
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.000
AALB000416 Anopheles albimanus AALB000416 I 0.000
AARA011014 Anopheles arabiensis AARA011014 I 0.000
AATE013317 Anopheles atroparvus AATE013317 I 0.000
ACOM023916 Anopheles coluzzii ACOM023916 I 0.000
ACUA008697 Anopheles culicifacies ACUA008697 I 0.000
ADAC004417 Anopheles darlingi ADAC004417 I 0.000
ADIR010890 Anopheles dirus ADIR010890 I 0.000
AEPI001842 Anopheles epiroticus AEPI001842 I 0.000
AFAF008895 Anopheles farauti AFAF008895 I 0.000
AFUN010568 Anopheles funestus AFUN010568 I 0.000
AGAP008567 Anopheles gambiae AGAP008567 I 0.000
AGAP008569 Anopheles gambiae AGAP008569 I 0.000
AGAP008563 Anopheles gambiae AGAP008563 I 0.000
AMAM010638 Anopheles maculatus AMAM010638 I 0.000
AMEC014683 Anopheles melas AMEC014683 I 0.000
AMEC012505 Anopheles melas AMEC012505 I 0.000
AMEM005379 Anopheles merus AMEM005379 I 0.000
AMIN000992 Anopheles minimus AMIN000992 I 0.000
AQUA000256 Anopheles quadriannulatus AQUA000256 I 0.000
ASTEI05184 Anopheles stephensi ASTEI05184 I 0.000
ASTEI05186 Anopheles stephensi ASTEI05186 I 0.000
GB45715 Apis mellifera GB45715 I 0.000
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.000
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.000
TBX20 Bos taurus ENSBTAG00000017541 I 0.000
e_gw.90.81.1 Branchiostoma floridae e_gw.90.81.1 I 0.000
CJA32610 Caenorhabditis japonica CJA32610 I 0.000
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.000
TBX20 Canis familiaris ENSCAFG00000028536 I 0.000
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.000
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.000
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.000
tbx20 Ciona intestinalis ENSCING00000005267 I 0.000
csin100383 Clonorchis sinensis csin100383 I 0.000
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.000
tbx20 Danio rerio ENSDARG00000005150 I 0.000
DAPPUDRAFT_59354 Daphnia pulex DAPPUDRAFT_59354 I 0.000
DAPPUDRAFT_59366 Daphnia pulex DAPPUDRAFT_59366 I 0.000
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.000
GF14392 Drosophila ananassae FBgn0091419 I 0.000
GF24374 Drosophila ananassae FBgn0101368 I 0.000
GF14390 Drosophila ananassae FBgn0091417 I 0.000
GG25073 Drosophila erecta FBgn0117202 I 0.000
GG14368 Drosophila erecta FBgn0106627 I 0.000
GG25071 Drosophila erecta FBgn0117200 I 0.000
GH16540 Drosophila grimshawi FBgn0124011 I 0.000
Doc3 Drosophila melanogaster FBgn0035954 D 0.000
mid Drosophila melanogaster FBgn0261963 D 0.000
H15 Drosophila melanogaster FBgn0016660 I 0.000
GI17985 Drosophila mojavensis FBgn0140725 I 0.000
GI17986 Drosophila mojavensis FBgn0140726 I 0.000
GL15033 Drosophila persimilis FBgn0152637 I 0.000
GL25841 Drosophila persimilis FBgn0163425 I 0.000
GA19742 Drosophila pseudoobscura FBgn0079738 I 0.000
GA25466 Drosophila pseudoobscura FBgn0246844 I 0.000
GA18655 Drosophila pseudoobscura FBgn0078655 I 0.000
GM18547 Drosophila sechellia FBgn0173454 I 0.000
GM25112 Drosophila sechellia FBgn0179973 I 0.000
GM18548 Drosophila sechellia FBgn0173455 I 0.000
GD14148 Drosophila simulans FBgn0185836 I 0.000
GD23340 Drosophila simulans FBgn0194726 I 0.000
GD23341 Drosophila simulans FBgn0194727 I 0.000
GJ19568 Drosophila virilis FBgn0206710 I 0.000
GJ19565 Drosophila virilis FBgn0206707 I 0.000
GK15086 Drosophila willistoni FBgn0217091 I 0.000
GK15084 Drosophila willistoni FBgn0217089 I 0.000
GK12352 Drosophila willistoni FBgn0214362 I 0.000
GE25417 Drosophila yakuba FBgn0242487 I 0.000
GE20799 Drosophila yakuba FBgn0238093 I 0.000
GE25406 Drosophila yakuba FBgn0242479 I 0.000
EmuJ_000377200 Echinococcus multilocularis EmuJ_000377200 I 0.000
TBX20 Echinops telfairi ENSETEG00000012771 I 0.000
TBX20 Equus caballus ENSECAG00000018182 I 0.000
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.000
D915_09218 Fasciola hepatica D915_09218 I 0.000
TBX20 Felis catus ENSFCAG00000013004 I 0.000
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.000
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.000
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.000
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.000
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.000
HCOI01255700 Haemonchus contortus HCOI01255700 I 0.000
HMEL012426 Heliconius melpomene HMEL012426 I 0.000
HelroG134299 Helobdella robusta HelroG134299 I 0.000
HelroG98030 Helobdella robusta HelroG98030 I 0.000
TBX20 Homo sapiens ENSG00000164532 D 0.000
HDID_0000627201 Hymenolepis diminuta HDID_0000627201 I 0.000
HmN_000695600 Hymenolepis microstoma HmN_000695600 I 0.000
HNAJ_0000047101 Hymenolepis nana HNAJ_0000047101 I 0.000
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.000
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.000
LotgiG129083 Lottia gigantea LotgiG129083 I 0.000
LotgiG179359 Lottia gigantea LotgiG179359 I 0.000
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.000
LCUP000433 Lucilia cuprina LCUP000433 I 0.000
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.000
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.000
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.000
MCOS_0000012101 Mesocestoides corti MCOS_0000012101 I 0.000
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.000
MDOA009961 Musca domestica MDOA009961 I 0.000
MDOA010319 Musca domestica MDOA010319 I 0.000
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.000
Tbx20 Mus musculus ENSMUSG00000031965 D 0.000
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.000
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.000
NV17866 Nasonia vitripennis NV17866 I 0.000
NV17864 Nasonia vitripennis NV17864 I 0.000
NEMVEDRAFT_v1g117456 Nematostella vectensis NEMVEDRAFT_v1g117456 I 0.000
NEMVEDRAFT_v1g117393 Nematostella vectensis NEMVEDRAFT_v1g117393 I 0.000
NEMVEDRAFT_v1g106123 Nematostella vectensis NEMVEDRAFT_v1g106123 I 0.000
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.000
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.000
Ocbimv22004458m.g Octopus bimaculoides Ocbimv22004458m.g I 0.000
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.000
T265_12717 Opisthorchis viverrini T265_12717 I 0.000
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.000
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.000
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.000
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.000
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.000
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.000
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.000
PTRK_0000394000 Parastrongyloides trichosuri PTRK_0000394000 N 0.000
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.000
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.000
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.000
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.000
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.000
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I 0.000
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.000
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.000
Sjc_0040480 Schistosoma japonicum Sjc_0040480 I 0.000
Smp_003900 Schistosoma mansoni Smp_003900 I 0.000
SMU15033270 Schmidtea mediterranea SMU15033270 I 0.000
L898_g31228 Steinernema monticolum L898_g31228 N 0.000
SMAR008438 Strigamia maritima SMAR008438 I 0.000
SMAR015389 Strigamia maritima SMAR015389 I 0.000
XP_001195863 Strongylocentrotus purpuratus XP_001195863 D 0.000
SPAL_0000556200 Strongyloides papillosus SPAL_0000556200 N 0.000
SSTP_0001033100 Strongyloides stercoralis SSTP_0001033100 N 0.000
TBX20 Sus scrofa ENSSSCG00000016662 I 0.000
TASK_0000456901 Taenia asiatica TASK_0000456901 I 0.000
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.000
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.000
tetur32g01390 Tetranychus urticae tetur32g01390 I 0.000
tetur32g01430 Tetranychus urticae tetur32g01430 I 0.000
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.000
TC014296 Tribolium castaneum TC014296 I 0.000
TMUE_s0080002600 Trichuris muris TMUE_s0080002600 I 0.000
TTRE_0000323501 Trichuris trichiura TTRE_0000323501 I 0.000
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.000
tbx20.L Xenopus laevis XB-GENE-865696 I 0.000
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.000
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.000
L798_07505 Zootermopsis nevadensis L798_07505 I 0.000