Onecut1 (Rattus norvegicus)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSRNOG00000008095 T167253_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ONECUT1
M02943_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_1
1.000 1.000
ONECUT1
M02944_2.00
Homo sapiens
DDTATYGATTTTHN

NDAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT1_2
1.000 1.000
ONECUT1
M03715_2.00
Homo sapiens
HRATCGATAHH

DDTATCGATYD
SELEX
Nitta et al.(2015)
ONECUT1_1
1.000 1.000
ONECUT1
M04673_2.00
Homo sapiens
NNATCGATYN

NRATCGATNN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX
1.000 1.000
ONECUT1
M04675_2.00
Homo sapiens
NNCGATCGATAN

NTATCGATCGNN
SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX
1.000 1.000
ONECUT1
M09022_2.00
Homo sapiens
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B
1.000 1.000
Onecut1
M09026_2.00
Mus musculus
NBBATTGATYN

NRATCAATVVN
Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A
1.000 1.000
Onecut1
M09520_2.00
Mus musculus
NRATCRATMN

NKATYGATYN
Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394
1.000 1.000
ONECUT1
M10418_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q4
1.000 1.000
ONECUT1
M10419_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF6_Q6_01
1.000 1.000
ONECUT1
M04674_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX
1.000 1.000
ONECUT1
M04676_2.00
Homo sapiens
RYSRATCAATAM

KTATTGATYSRY
SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX
1.000 1.000
ONECUT2
M02942_2.00
Homo sapiens
DDTATYGATTTTYN

NRAAAATCRATAHH
SELEX
Jolma et al.(2013)
ONECUT2_1
0.948 0.948
ONECUT2
M03714_2.00
Homo sapiens
NDDTATCGATYBNN

NNVRATCGATAHHN
SELEX
Nitta et al.(2015)
ONECUT2_1
0.948 0.948
ONECUT2
M04667_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX
0.948 0.948
ONECUT2
M04669_2.00
Homo sapiens
NNSGATCGATAH

DTATCGATCSNN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1
0.948 0.948
ONECUT2
M04670_2.00
Homo sapiens
NKATYGATYDN

NHRATCRATMN
SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2
0.948 0.948
ONECUT2
M10417_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OC2_Q3
0.948 0.948
ONECUT2
M04668_2.00
Homo sapiens
DTATTGATYN

NRATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX
0.948 0.948
ONECUT2
M04671_2.00
Homo sapiens
ACSGATCAATAM

KTATTGATCSGT
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1
0.948 0.948
ONECUT2
M04672_2.00
Homo sapiens
DTATTGATTDN

NHAATCAATAH
SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2
0.948 0.948
ONECUT3
M02945_2.00
Homo sapiens
DWTATYGATTTTYN

NRAAAATCRATAWH
SELEX
Jolma et al.(2013)
ONECUT3_1
0.918 0.918
ONECUT3
M04677_2.00
Homo sapiens
NNATYGATYN

NRATCRATNN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX
0.918 0.918
ONECUT3
M04678_2.00
Homo sapiens
NTATTGATYN

NRATCAATAN
SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX
0.918 0.918
onecut
M03716_2.00
Drosophila melanogaster
NNVRATCRATAHNN

NNDTATYGATYBNN
SELEX
Nitta et al.(2015)
onecut_1
0.881 0.881
onecut
M03717_2.00
Drosophila melanogaster
NNTATYGATTWNN

NNWAATCRATANN
SELEX
Nitta et al.(2015)
onecut_2
0.881 0.881
onecut
M06472_2.00
Drosophila melanogaster
HAATCAA

TTGATTD
B1H
Mathelier et al.(2014)
MA0235.1
0.881 0.881
ceh-48
M01905_2.00
Caenorhabditis elegans
NNATYGRNN

NNYCRATNN
PBM
Weirauch et al.(2014)
pTH8982
0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000038480 CUT 288 366
ENSRNOP00000038480 Homeodomain 386 440

Links

Other CUT,Homeodomain family TFs
Other Rattus norvegicus TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFHX3 Homo sapiens ENSG00000140836 D 0.000
ZFHX3 Ornithorhynchus anatinus ENSOANG00000005084 I 0.000
ENSPPYG00000007513 Pongo abelii ENSPPYG00000007513 I 0.000
ENSPPYG00000018687 Pongo abelii ENSPPYG00000018687 I 0.000
ENSPSIG00000003765 Pelodiscus sinensis ENSPSIG00000003765 I 0.000
ENSPSIG00000004618 Pelodiscus sinensis ENSPSIG00000004618 I 0.000
ZFHX3 Pan troglodytes ENSPTRG00000008340 I 0.000
ZFHX4 Pan troglodytes ENSPTRG00000020358 I 0.000
ZFHX4 Pteropus vampyrus ENSPVAG00000004200 I 0.000
Zfhx4 Rattus norvegicus ENSRNOG00000008765 I 0.000
Zfhx3 Rattus norvegicus ENSRNOG00000014452 I 0.000
ZFHX4 Sorex araneus ENSSARG00000001090 I 0.000
ZFHX3 Sorex araneus ENSSARG00000011764 I 0.000
ENSPFOG00000009152 Poecilia formosa ENSPFOG00000009152 I 0.000
ENSPFOG00000001702 Poecilia formosa ENSPFOG00000001702 I 0.000
ZFHX3 Procavia capensis ENSPCAG00000010600 I 0.000
ENSOARG00000003669 Ovis aries ENSOARG00000003669 I 0.000
ENSOARG00000007353 Ovis aries ENSOARG00000007353 I 0.000
ZFHX4 Oryctolagus cuniculus ENSOCUG00000001723 I 0.000
ENSOCUG00000017910 Oryctolagus cuniculus ENSOCUG00000017910 I 0.000
ZFHX4 Otolemur garnettii ENSOGAG00000000486 I 0.000
ZFHX3 Otolemur garnettii ENSOGAG00000010886 I 0.000
ENSONIG00000005914 Oreochromis niloticus ENSONIG00000005914 I 0.000
ENSONIG00000014495 Oreochromis niloticus ENSONIG00000014495 I 0.000
zfhx4 Oryzias latipes ENSORLG00000006928 I 0.000
zfhx3 Oryzias latipes ENSORLG00000007874 I 0.000
ENSPANG00000010456 Papio anubis ENSPANG00000010456 I 0.000
ENSPANG00000023610 Papio anubis ENSPANG00000023610 I 0.000
ENSSHAG00000013776 Sarcophilus harrisii ENSSHAG00000013776 I 0.000
ENSSHAG00000014394 Sarcophilus harrisii ENSSHAG00000014394 I 0.000
ZFHX3 Sus scrofa ENSSSCG00000002752 I 0.000
Cflo_00361--XP_393785.3_APIME Camponotus floridanus Cflo_00361--XP_393785.3_APIME I 0.000
ENSBTAP00000019489-D1 Bos grunniens ENSBTAP00000019489-D1 I 0.000
ENSP00000268489 Macaca fascicularis ENSP00000268489 I 0.000
ENSP00000382394-D1 Bos grunniens ENSP00000382394-D1 I 0.000
ENSP00000382394 Macaca fascicularis ENSP00000382394 I 0.000
Gfo_R000560 Geospiza fortis Gfo_R000560 I 0.000
Gfo_R007559 Geospiza fortis Gfo_R007559 I 0.000
Myotis_brandtii_ZFHX3_10022430 Myotis brandtii Myotis_brandtii_ZFHX3_10022430 I 0.000
Ogr16853 Ophisaurus gracilis Ogr16853 I 0.000
Pvit_00058 Pogona vitticeps Pvit_00058 I 0.000
Pvit_16272 Pogona vitticeps Pvit_16272 I 0.000
Tal_R008844 Tyto alba Tal_R008844 I 0.000
XP_002939633 Xenopus tropicalis XP_002939633 I 0.000
Alligator_sinensis_CCG000692.1 Alligator sinensis Alligator_sinensis_CCG000692.1 I 0.000
Afo_R013178 Aptenodytes forsteri Afo_R013178 I 0.000
ZFHX4 Sus scrofa ENSSSCG00000006169 I 0.000
ENSSTOG00000024425 Ictidomys tridecemlineatus ENSSTOG00000024425 I 0.000
ENSSTOG00000027206 Ictidomys tridecemlineatus ENSSTOG00000027206 I 0.000
ZFHX4 Tupaia belangeri ENSTBEG00000012567 I 0.000
ZFHX3 Taeniopygia guttata ENSTGUG00000008190 I 0.000
zfhx4 Takifugu rubripes ENSTRUG00000000173 I 0.000
zfhx3 Takifugu rubripes ENSTRUG00000017601 I 0.000
ZFHX3 Tursiops truncatus ENSTTRG00000002935 I 0.000
ENSXMAG00000000693 Xiphophorus maculatus ENSXMAG00000000693 I 0.000
Aan_R002979 Calypte anna Aan_R002979 I 0.000
Aan_R009157 Calypte anna Aan_R009157 I 0.000
Afo_R007434 Aptenodytes forsteri Afo_R007434 I 0.000
zfhx3 Xenopus tropicalis XB-GENE-853731 I 0.000
ZFHX3 Anolis carolinensis ENSACAG00000008238 I 0.000
ENSCSAG00000013465 Chlorocebus sabaeus ENSCSAG00000013465 I 0.000
si:ch73-386h18.1 Danio rerio ENSDARG00000073944 I 0.000
zfhx4 Danio rerio ENSDARG00000075542 I 0.000
zfhx3 Danio rerio ENSDARG00000103057 I 0.000
ZFHX3 Dasypus novemcinctus ENSDNOG00000046047 I 0.000
Zfhx3 Dipodomys ordii ENSDORG00000016147 I 0.000
ZFHX4 Equus caballus ENSECAG00000022611 I 0.000
ZFHX3 Equus caballus ENSECAG00000022984 I 0.000
ZFHX3 Erinaceus europaeus ENSEEUG00000008705 I 0.000
ZFHX3 Echinops telfairi ENSETEG00000014223 I 0.000
ENSFALG00000002706 Ficedula albicollis ENSFALG00000002706 I 0.000
ENSFALG00000008584 Ficedula albicollis ENSFALG00000008584 I 0.000
ENSCSAG00000004171 Chlorocebus sabaeus ENSCSAG00000004171 I 0.000
ZFHX4 Cavia porcellus ENSCPOG00000012693 I 0.000
ZFHX3 Cavia porcellus ENSCPOG00000009111 I 0.000
ENSAMEG00000002197 Ailuropoda melanoleuca ENSAMEG00000002197 I 0.000
ENSAMEG00000016203 Ailuropoda melanoleuca ENSAMEG00000016203 I 0.000
ENSAMXG00000004340 Astyanax mexicanus ENSAMXG00000004340 I 0.000
ENSAMXG00000013609 Astyanax mexicanus ENSAMXG00000013609 I 0.000
ENSAPLG00000002327 Anas platyrhynchos ENSAPLG00000002327 I 0.000
ENSAPLG00000012910 Anas platyrhynchos ENSAPLG00000012910 I 0.000
ZFHX3 Bos taurus ENSBTAG00000014636 I 0.000
ZFHX4 Bos taurus ENSBTAG00000033268 I 0.000
ZFHX4 Canis familiaris ENSCAFG00000008310 I 0.000
ZFHX3 Canis familiaris ENSCAFG00000020243 I 0.000
ZFHX4 Callithrix jacchus ENSCJAG00000000517 I 0.000
ZFHX3 Callithrix jacchus ENSCJAG00000015112 I 0.000
ZFHX4 Felis catus ENSFCAG00000015688 I 0.000
ZFHX3 Felis catus ENSFCAG00000023839 I 0.000
ZFHX3 Meleagris gallopavo ENSMGAG00000008764 I 0.000
ENSMGAG00000011602 Meleagris gallopavo ENSMGAG00000011602 I 0.000
ZFHX3 Microcebus murinus ENSMICG00000003537 I 0.000
ZFHX4 Microcebus murinus ENSMICG00000008252 I 0.000
ZFHX3 Myotis lucifugus ENSMLUG00000016100 I 0.000
ZFHX3 Macaca mulatta ENSMMUG00000021041 I 0.000
ZFHX3 Monodelphis domestica ENSMODG00000002600 I 0.000
ZFHX4 Monodelphis domestica ENSMODG00000006777 I 0.000
ENSMPUG00000007747 Mustela putorius furo ENSMPUG00000007747 I 0.000
ENSMPUG00000010092 Mustela putorius furo ENSMPUG00000010092 I 0.000
Zfhx4 Mus musculus ENSMUSG00000025255 I 0.000
Zfhx3 Mus musculus ENSMUSG00000038872 I 0.000
ENSNLEG00000001972 Nomascus leucogenys ENSNLEG00000001972 I 0.000
ENSLOCG00000013472 Lepisosteus oculatus ENSLOCG00000013472 I 0.000
ENSLOCG00000004206 Lepisosteus oculatus ENSLOCG00000004206 I 0.000
ZFHX4 Homo sapiens ENSG00000091656 I 0.000
zfhx4 Gasterosteus aculeatus ENSGACG00000002418 I 0.000
zfhx3 Gasterosteus aculeatus ENSGACG00000015779 I 0.000
ZFHX3 Gallus gallus ENSGALG00000000713 I 0.000
ENSGALG00000015673 Gallus gallus ENSGALG00000015673 I 0.000
ZFHX3 Gorilla gorilla ENSGGOG00000012083 I 0.000
ZFHX4 Gorilla gorilla ENSGGOG00000024837 I 0.000
ENSGMOG00000002909 Gadus morhua ENSGMOG00000002909 I 0.000
ENSLACG00000015046 Latimeria chalumnae ENSLACG00000015046 I 0.000
ZFHX4 Loxodonta africana ENSLAFG00000014395 I 0.000
ZFHX3 Loxodonta africana ENSLAFG00000017476 I 0.000
ZFHX4 Macaca mulatta ENSMMUG00000019414 N 0.000
ZFHX4 Taeniopygia guttata ENSTGUG00000011605 N 0.000
Ogr06302 Ophisaurus gracilis Ogr06302 N 0.000
ENSLACG00000011472 Latimeria chalumnae ENSLACG00000011472 N 0.000
Alligator_sinensis_CCG018101.1 Alligator sinensis Alligator_sinensis_CCG018101.1 N 0.000