L898_g12845 (Steinernema monticolum)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02376 (CUT)
PF00046 (Homeobox) 		IPR003350
IPR001356 		L898_g12845 T167582_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
onecut
M03716_2.00 		Drosophila melanogaster
NNVRATCRATAHNN
NNDTATYGATYBNN		 SELEX
Nitta et al.(2015)
onecut_1 		0.728 0.728
onecut
M03717_2.00 		Drosophila melanogaster
NNTATYGATTWNN
NNWAATCRATANN		 SELEX
Nitta et al.(2015)
onecut_2 		0.728 0.728
onecut
M06472_2.00 		Drosophila melanogaster
HAATCAA
TTGATTD		 B1H
Mathelier et al.(2014)
MA0235.1 		0.728 0.728
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g12845.t1 CUT 369 447
L898_g12845.t1 Homeodomain 498 554
L898_g12845.t2 CUT 374 452
L898_g12845.t2 Homeodomain 503 559

Links

Other CUT,Homeodomain family TFs
Other Steinernema monticolum TFs

Invalid Input OrderBy

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action