CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g08192
(
Acanthocheilonema viteae
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
nAv.1.0.1.g08192
T167589_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t08192-RA
CUT
550
631
GSKALNTTEIAKQCKHLMVTHNIGQRLFAKYVMNQVVKSQGSLSELLSKPRHWNKLTDKGREAFRRMYGWVSDPKAIELLCS
nAv.1.0.1.t08192-RA
CUT
819
893
RYPVLDTEDIVRQIKDFLCLNSISQRQFGEHVLGLSQGSVSDLLARPKPWAMLTQKGREPFVRMQLFLNEAQSLV
nAv.1.0.1.t08192-RA
CUT
976
1051
LMADTSEIARQVKDRLHSSGISQKTFGDVVLGVSPGGVSELLAKPKTWEQLSPRARDLYLKMSEWLSELDGNRKIQ
nAv.1.0.1.t08192-RA
Homeodomain
1105
1161
KAQRTVITDQQKEALKHVFERDQHPNQRTIEQLSQTLSLSTRTVSNWFHNYRTRQKA
Links
Other
CUT,Homeodomain
family TFs
Other
Acanthocheilonema viteae
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy