CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dnmt1
(
Tetraodon nigroviridis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSTNIG00000018567
T168361_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DNMT1
M01913_2.00
Homo sapiens
NNNNNCGGNN
NNCCGNNNNN
PBM
Weirauch et al.(2014)
pTH7029
0.745
0.745
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000019029
CxxC
364
410
VVGVKRHRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRC
ENSTNIP00000021741
CxxC
352
398
VVGVKRHRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRC
Links
Other
CxxC
family TFs
Other
Tetraodon nigroviridis
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy