CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG180456
(
Helobdella robusta
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
HelroG180456
T168452_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.745
0.745
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.745
0.745
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP180456
CxxC
149
195
VLRRRRVRCKKCGPCIRGECGECHYCKDMKKFGGLGRMKQTCINRQC
Links
Other
CxxC
family TFs
Other
Helobdella robusta
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy