CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Y75B8A.6
(
Caenorhabditis elegans
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
WBGene00013543
T168541_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA binding activity and zinc ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00652_2.00
CxxC
51
97
HRSTTSRRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
M00652_2.00
CxxC
111
156
TFKARVGCNACEDCRMQDCQICLVCLDKRFFENRHIPGAMCAKKRC
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y75B8A.6
CxxC
79
125
HRSTTSRRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
Y75B8A.6
CxxC
139
184
TFKARVGCNACEDCRMQDCQICLVCLDKRFFENRHIPGAMCAKKRC
Links
Other
CxxC
family TFs
Other
Caenorhabditis elegans
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy