CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30045758m.g
(
Saccoglossus kowalevskii
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
Sakowv30045758m.g
T168675_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TET1
M01914_2.00
Homo sapiens
NNHVCGHNN
NNDCGBDNN
PBM
Weirauch et al.(2014)
pTH9605
0.738
0.738
ENSMGAG00000004157_CONSTRUCT
M01920_2.00
PBM CONSTRUCTS
NNNNRVGBNN
NNVCBYNNNN
PBM
Weirauch et al.(2014)
pTH9719
0.738
0.738
CXXC5
M01210_2.00
Homo sapiens
NNNDCKNN
NNMGHNNN
PBM
Lambert et al.(2019)
pTH11216
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23948985_peptide
CxxC
230
271
LKKKKRKRCGLCEPCLTKTNCGECSSCRNRRTGHQICKLRKC
Links
Other
CxxC
family TFs
Other
Saccoglossus kowalevskii
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy