CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g11692
(
Steinernema feltiae
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
L889_g11692
T168811_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.828
0.828
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g11692.t1
CxxC
104
150
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
L889_g11692.t1
CxxC
164
209
TFKARQGCNNCEDCRMADCMTCLVCLDKKFFDNRYMTGAMCAKKRC
L889_g11692.t2
CxxC
98
144
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
L889_g11692.t2
CxxC
158
203
TFKARQGCNNCEDCRMADCMTCLVCLDKKFFDNRYMTGAMCAKKRC
L889_g11692.t3
CxxC
98
144
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
L889_g11692.t3
CxxC
158
203
TFKARQGCNNCEDCRMADCMTCLVCLDKKFFDNRYMTGAMCAKKRC
Links
Other
CxxC
family TFs
Other
Steinernema feltiae
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy