XP_002158720.1 (Hydra magnipapillata)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 XP_002158720.1 T169576_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
dmrt99B
M01935_2.00
Drosophila melanogaster
WRTWDCNDNN

NNHNGHWAYW
PBM
Weirauch et al.(2014)
pTH9261
0.940 0.851
dmrt99B
M01211_2.00
Drosophila melanogaster
NNHDTDDNNN

NNNHHAHDNN
PBM
Lambert et al.(2019)
pTH9799
0.940 0.851
dmrt99B
M03720_2.00
Drosophila melanogaster
HNGHWACAATGTWDCND

HNGHWACATTGTWDCND
SELEX
Nitta et al.(2015)
dmrt99B_1
0.940 0.851
DMRTA2
M01930_2.00
Homo sapiens
NNHDTDDNNN

NNNHHAHDNN
PBM
Weirauch et al.(2014)
pTH9198
0.940 0.830
dmrta2
M01937_2.00
Xenopus tropicalis
NNWDWDDN

NHHWHWNN
PBM
Weirauch et al.(2014)
pTH9300
0.940 0.830
DMRTA2
M04692_2.00
Homo sapiens
VHTGTWDCVDHN

NDHBGHWACADB
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
0.940 0.830
DMRTA2
M10433_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT5_01
0.940 0.830
DMRTA2
M04693_2.00
Homo sapiens
HHTGTWDCVNHN

NDNBGHWACADD
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
0.940 0.830
DMRT2
M01931_2.00
Homo sapiens
NAATKTATHN

NDATAMATTN
PBM
Weirauch et al.(2014)
pTH9189
0.938 0.830
DMRT2
M10434_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT2_01
0.938 0.830
DMRT1
M01928_2.00
Homo sapiens
NDWGTWDCNN

NNGHWACWHN
PBM
Weirauch et al.(2014)
pTH9197
0.932 0.851
DMRT1
M01929_2.00
Homo sapiens
TGTATCAA

TTGATACA
PBM
Weirauch et al.(2014)
pTH9446
0.932 0.851
DMRT1
M04683_2.00
Homo sapiens
NWTGTWDCVWHN

NDWBGHWACAWN
SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX
0.932 0.851
DMRT1
M10431_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT1_01
0.932 0.851
DMRT1
M04684_2.00
Homo sapiens
NDYGTWDCVNNN

NNNBGHWACRHN
SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX
0.932 0.851
Dmrt1
M09027_2.00
Mus musculus
HDGHWACAAWGTWDCHN

NDGHWACWTTGTWDCHD
Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C
0.924 0.830
dmd-5
M00659_2.00
Caenorhabditis elegans
WNWRTWDHNN

NNDHWAYWNW
PBM
Narasimhan et al.(2015)
pTH10777
0.924 0.766
dmd-4
M00656_2.00
Caenorhabditis elegans
NWGTAWCNNN

NNNGWTACWN
PBM
Narasimhan et al.(2015)
pTH10640
0.918 0.766
DMRT3
M01927_2.00
Homo sapiens
NWTGTAWCMNN

NNKGWTACAWN
PBM
Weirauch et al.(2014)
pTH9188
0.904 0.766
DMRT3
M04681_2.00
Homo sapiens
AWTGTAWCAAWWH

DWWTTGWTACAWT
SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX
0.904 0.766
DMRT3
M10430_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT3_01
0.904 0.766
DMRT3
M04682_2.00
Homo sapiens
AATGTAWCRAWWY

RWWTYGWTACATT
SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX
0.904 0.766
dmrt93B
M03718_2.00
Drosophila melanogaster
NDTGTATCRWW

WWYGATACAHN
SELEX
Nitta et al.(2015)
dmrt93B_1
0.872 0.638
dmrt93B
M03719_2.00
Drosophila melanogaster
NNHGTAWCNNN

NNNGWTACDNN
SELEX
Nitta et al.(2015)
dmrt93B_2
0.872 0.638
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002158720.1 DM 13 59

Links

Other DM family TFs
Other Hydra magnipapillata TFs

544 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012134 Calypte anna Aan_R012134 I 0.000
Brh_R013532 Buceros rhinoceros Brh_R013532 I 0.000
CapteG139538 Capitella teleta CapteG139538 N 0.000
CLEC025153 Cimex lectularius CLEC025153 I 0.000
D915_09501 Fasciola hepatica D915_09501 I 0.000
D918_09737 Trichuris suis D918_09737 N 0.000
DILT_0001314701 Diphyllobothrium latum DILT_0001314701 N 0.000
ENSCSAG00000007217 Chlorocebus sabaeus ENSCSAG00000007217 I 0.000
ENSMEUG00000003851 Macropus eugenii ENSMEUG00000003851 I 0.000
ENSMGAG00000015905 Meleagris gallopavo ENSMGAG00000015905 I 0.000
ENSPANG00000019600 Papio anubis ENSPANG00000019600 I 0.000
ENSPMAG00000005538 Petromyzon marinus ENSPMAG00000005538 N 0.000
ENSPSIG00000016694 Pelodiscus sinensis ENSPSIG00000016694 N 0.000
LDEC001304 Leptinotarsa decemlineata LDEC001304 I 0.000
MCOS_0000352701 Mesocestoides corti MCOS_0000352701 N 0.000
MEIS2 Taeniopygia guttata ENSTGUG00000011748 I 0.000
MEIS2 Sorex araneus ENSSARG00000006585 I 0.000
Meis3 Mus musculus ENSMUSG00000041420 D 0.000
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.000
nRc.2.0.1.g19666 Romanomermis culicivorax nRc.2.0.1.g19666 N 0.000
PKNOX1 Procavia capensis ENSPCAG00000016718 I 0.000
Pknox2 Dipodomys ordii ENSDORG00000008635 I 0.000
PKNOX2 Choloepus hoffmanni ENSCHOG00000008048 I 0.000
Pvit_18888 Pogona vitticeps Pvit_18888 I 0.000
RO3G_00994 Rhizopus oryzae RO3G_00994 N 0.000
SCUD_0001235001 Schistosoma curassoni SCUD_0001235001 N 0.000
SPER_0001318201 Spirometra erinaceieuropaei SPER_0001318201 N 0.000
Tal_R002601 Tyto alba Tal_R002601 I 0.000
Tgif2 Mus musculus ENSMUSG00000062175 D 0.000
TRE_0000372801 Trichobilharzia regenti TRE_0000372801 N 0.000
TTRE_0000256401 Trichuris trichiura TTRE_0000256401 N 0.000