CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DME_0000089401
(
Dracunculus medinensis
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
DME_0000089401
T169766_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-3
M00653_2.00
Caenorhabditis elegans
NWTGTTGCRN
NYGCAACAWN
PBM
Narasimhan et al.(2015)
pTH8998
0.851
0.656
mab-3
M07546_2.00
Caenorhabditis elegans
AATGTTGCSWWNT
ANWWSGCAACATT
EMSA
Mathelier et al.(2014)
MA0262.1
0.851
0.656
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DME_0000089401-mRNA-1
DM
26
71
KRYYCQRCLNHKQQHPRKGHKPFCQYANCECADCRMVEERRRLNNM
DME_0000089401-mRNA-1
DM
93
140
RDPKCALCSAHGDKQPLRGHKKAQCPFLKCGCHLCGLVENRRTLMARQ
Links
Other
DM
family TFs
Other
Dracunculus medinensis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy