CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB0171G10030
(
Oryza brachyantha
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02701 (zf-Dof)
IPR003851
OB0171G10030
T170720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DOF3.2
M01943_2.00
Arabidopsis thaliana
NHDNNNNN
NNNNNHDN
PBM
Weirauch et al.(2014)
pTH7183
0.531
0.531
DOF3.2
M06847_2.00
Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN
NNDDADDNNAAAAAGBDRN
Dap-seq
OMalley et al.(2016)
At3g45610_col_a
0.531
0.531
DOF3.2
M06848_2.00
Arabidopsis thaliana
NNHDDYHVCTTTTTB
VAAAAAGBDRHHDNN
Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a
0.531
0.531
Q6RK62_WHEAT
M10441_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PBF_Q2_01
0.531
0.531
For this family, TFs with SR scores >
0.508
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB0171G10030.1
Dof
15
46
KKRSTSCRRYWMHGGSLRNIPIGSSTCKRPRA
Links
Other
Dof
family TFs
Other
Oryza brachyantha
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy