CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa019468mg
(
Prunus persica
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02701 (zf-Dof)
IPR003851
PRUPE_ppa019468mg
T171054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DOF3.2
M01943_2.00
Arabidopsis thaliana
NHDNNNNN
NNNNNHDN
PBM
Weirauch et al.(2014)
pTH7183
0.528
0.528
DOF5.3
M01947_2.00
Arabidopsis thaliana
CKTTNNN
NNNAAMG
PBM
Weirauch et al.(2014)
pTH7182
0.528
0.528
PK01144.1
M01213_2.00
Cannabis sativa
NCTTTWN
NWAAAGN
PBM
Lambert et al.(2019)
pTH10160
0.528
0.528
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN
NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.528
0.528
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN
NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.528
0.528
DOF3.2
M06847_2.00
Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN
NNDDADDNNAAAAAGBDRN
Dap-seq
OMalley et al.(2016)
At3g45610_col_a
0.528
0.528
DOF3.2
M06848_2.00
Arabidopsis thaliana
NNHDDYHVCTTTTTB
VAAAAAGBDRHHDNN
Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a
0.528
0.528
DOF1.8
M01939_2.00
Arabidopsis thaliana
NNNCKTTHNN
NNDAAMGNNN
PBM
Weirauch et al.(2014)
pTH7256
0.509
0.509
DOF1.8
M01062_2.00
Arabidopsis thaliana
NHVCTTTWH
DWAAAGBDN
PBM
Sullivan et al.(2014)
pTH7653
0.509
0.509
DOF3.1
M01942_2.00
Arabidopsis thaliana
NCKTTNNN
NNNAAMGN
PBM
Weirauch et al.(2014)
pTH8190
0.509
0.509
PK20317.1
M01221_2.00
Cannabis sativa
CKTTWNN
NNWAAMG
PBM
Lambert et al.(2019)
pTH11298
0.509
0.509
PK20555.1
M01222_2.00
Cannabis sativa
NNNCTTTWNN
NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10144
0.509
0.509
DOF1.7
M06833_2.00
Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN
NDDNDNRAAAAGNWRAWDNND
Dap-seq
OMalley et al.(2016)
Adof1_col_a
0.509
0.509
DOF1.7
M06834_2.00
Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH
DNNDDNNAAAAAGYWRNNDNN
Dap-seq
OMalley et al.(2016)
Adof1_colamp_a
0.509
0.509
DOF1.8
M06835_2.00
Arabidopsis thaliana
WWWYHMCTTTTTNNNHNHW
WDNDNNNAAAAAGKDRWWW
Dap-seq
OMalley et al.(2016)
At1g64620_100ng20cy_b
0.509
0.509
DOF1.8
M06836_2.00
Arabidopsis thaliana
NHHMCTTTTTN
NAAAAAGKDDN
Dap-seq
OMalley et al.(2016)
At1g64620_colamp_a
0.509
0.509
DOF5.8
M06868_2.00
Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW
WDNDDNNMAAAAGNDAAARDDDDRDDNDD
Dap-seq
OMalley et al.(2016)
AT5G66940_col_a
0.509
0.509
DOF5.8
M06869_2.00
Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH
DNDRDNNAAAAAGYWRHNDNN
Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a
0.509
0.509
For this family, TFs with SR scores >
0.508
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ20554
Dof
15
67
TSGLQCPRCASKFTKISHYNNKNLEQPRYFCNSCNRSWTVGGKVRDILAHCGY
Links
Other
Dof
family TFs
Other
Prunus persica
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy