CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF114300010CFD_g
(
Triticum aestivum
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02701 (zf-Dof)
IPR003851
TRAES3BF114300010CFD_g
T171262_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dof3
M02676_2.00
Zea mays
BRCTTT
AAAGYV
SELEX
Mathelier et al.(2014)
MA0021.1
0.577
0.577
Dof3
M10439_2.00
Zea mays
NBNCTTTNNBN
NVNNAAAGNVN
Transfac
Matys et al.(2006)
P$DOF3_01
0.577
0.577
For this family, TFs with SR scores >
0.508
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF114300010CFD_t1
Dof
116
153
EPGLNCPRCDSTNTEFFFFNNHSVTQPRNFCGECRLGL
TRAES3BF114300010CFD_t1
Dof
213
274
EPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCRACRRYWTRGGAVRNVPVGGGYRRSAKSKAS
Links
Other
Dof
family TFs
Other
Triticum aestivum
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy