CRE01589 (Caenorhabditis remanei)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 CRE01589 T172392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.452 0.452
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.452 0.452
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.452 0.452
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.444 0.444
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.444 0.444
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.444 0.444
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.444 0.444
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.444 0.444
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.444 0.444
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE01589 E2F 95 163
CRE01589 E2F 257 339

Links

Other E2F family TFs
Other Caenorhabditis remanei TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F443_19094 Phytophthora parasitica F443_19094 N 0.000
fgenesh_scip_prom.28083.11122 Phytophthora lateralis fgenesh_scip_prom.28083.11122 N 0.000
maker-piw_contig_198-snap-gene-0.25 Pythium iwayamai maker-piw_contig_198-snap-gene-0.25 N 0.000
maker-pve_contig_417-snap-gene-0.20 Pythium vexans maker-pve_contig_417-snap-gene-0.20 N 0.000
Phyra77610 Phytophthora ramorum Phyra77610 N 0.000
Physo128284 Phytophthora sojae Physo128284 N 0.000
PITG_02480 Phytophthora infestans PITG_02480 N 0.000
PYU1_G004510 Pythium ultimum PYU1_G004510 N 0.000