E2f6 (Rattus norvegicus)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 ENSRNOG00000004449 T172939_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
mouse homolog is a transcription factor; involved in the regulation of cell cycle progression [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2f6
M09043_2.00
Mus musculus
NDGGCGGGARVV

BBYTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A
1.000 1.000
E2F6
M08107_2.00
Homo sapiens
DGGMGGGARVN

NBYTCCCKCCH
ChIP-seq
Mathelier et al.(2014)
MA0471.1
0.985 0.985
E2F6
M07939_2.00
Homo sapiens
NDSGCGGGARV

BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD
0.985 0.985
E2F6
M07940_2.00
Homo sapiens
NDVGCGGGARV

BYTCCCGCBHN
ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD
0.985 0.985
E2F6
M07941_2.00
Homo sapiens
NDSGCGGGARV

BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha
0.985 0.985
E2F6
M09034_2.00
Homo sapiens
NRGGMGGGARRNN

NNYYTCCCKCCYN
Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A
0.985 0.985
E2F6
M09523_2.00
Homo sapiens
VGCGGGARNN

NNYTCCCGCB
Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477
0.985 0.985
E2F6
M10456_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F6_01
0.985 0.985
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN

NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.631 0.631
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN

NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.631 0.631
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR

YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.600 0.600
E2f3
M00153_2.00
Mus musculus
NNNNGCGSNN

NNSCGCNNNN
PBM
Badis et al.(2009)
E2F3_3752
0.585 0.585
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN

NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.585 0.585
E2F3
M01964_2.00
Taeniopygia guttata
NNSGCGCGMN

NKCGCGCSNN
PBM
Weirauch et al.(2014)
pTH9288
0.585 0.585
E2F3
M02956_2.00
Homo sapiens
RAAAAKGGCGCCAAAANN

NNTTTTGGCGCCMTTTTY
SELEX
Jolma et al.(2013)
E2F3_1
0.585 0.585
E2F3
M02957_2.00
Homo sapiens
DAAAADGGCGCCMWWTTY

RAAWWKGGCGCCHTTTTH
SELEX
Jolma et al.(2013)
E2F3_2
0.585 0.585
E2F3
M02958_2.00
Homo sapiens
NDTTTTGGCGCCAAAABH

DVTTTTGGCGCCAAAAHN
SELEX
Jolma et al.(2013)
E2F3_3
0.585 0.585
E2F3
M04701_2.00
Homo sapiens
DWTTTGGCGCCAAAWH

DWTTTGGCGCCAAAWH
SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX
0.585 0.585
E2FA
M06871_2.00
Arabidopsis thaliana
NDDDGGCGCCAWWW

WWWTGGCGCCHHHN
Dap-seq
OMalley et al.(2016)
E2FA_col_a
0.585 0.585
E2FA
M06872_2.00
Arabidopsis thaliana
DDWDGGCGCCAWAD

HTWTGGCGCCHWHH
Dap-seq
OMalley et al.(2016)
E2FA_colamp_a
0.585 0.585
E2FA
M08106_2.00
Arabidopsis thaliana
NVGCGCCAHN

NDTGGCGCBN
ChIP-seq
Mathelier et al.(2014)
MA1414.1
0.585 0.585
E2F3
M09031_2.00
Homo sapiens
NDGGCGGGAAR

YTTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A
0.585 0.585
E2f3
M09038_2.00
Mus musculus
DSGCGGGARV

BYTCCCGCSH
Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A
0.585 0.585
E2F3
M10454_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6_01
0.585 0.585
E2F3
M10455_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F3_Q6
0.585 0.585
E2F3
M04702_2.00
Homo sapiens
DTTTTGGCGCCAAAAH

DTTTTGGCGCCAAAAH
SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX
0.585 0.585
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND

HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.569 0.569
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN

NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.569 0.569
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW

WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.569 0.569
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA

TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.569 0.569
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA

TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.569 0.569
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW

WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.569 0.569
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN

NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.569 0.569
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN

NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.569 0.569
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN

NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.569 0.569
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND

HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.569 0.569
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC

GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.569 0.569
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN

NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.569 0.569
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN

NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.569 0.569
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH

DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.569 0.569
E2F4
M10457_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.569 0.569
E2F4
M10458_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.569 0.569
E2F4
M10459_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.569 0.569
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH

DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.554 0.554
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD

HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.554 0.554
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN

NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.554 0.554
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT

AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.554 0.554
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW

WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.554 0.554
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN

NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.554 0.554
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA

TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.554 0.554
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC

GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.554 0.554
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS

SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.554 0.554
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.554 0.554
E2F
M01959_2.00
Dictyostelium discoideum
NNGSGCGCSHN

NDSGCGCSCNN
PBM
Weirauch et al.(2014)
pTH5403
0.538 0.538
GSPATT00020286001
M01965_2.00
Paramecium tetraurelia
NNSGCGSBN

NVSCGCSNN
PBM
Weirauch et al.(2014)
pTH5647
0.538 0.538
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN

NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.523 0.523
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW

WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.523 0.523
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW

WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.523 0.523
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW

WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.523 0.523
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW

WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.523 0.523
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH

DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.523 0.523
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN

NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.523 0.523
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS

SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.523 0.523
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW

WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.523 0.523
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN

NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.523 0.523
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN

NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.523 0.523
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA

TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.523 0.523
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA

TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.523 0.523
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR

YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.523 0.523
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA

TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.523 0.523
E2F1
M10446_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.523 0.523
E2F1
M10447_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.523 0.523
E2F1
M10448_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.523 0.523
E2F1
M10449_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.523 0.523
E2F1
M10450_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.523 0.523
E2F1
M10451_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.523 0.523
E2F1
M10452_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.523 0.523
E2F1
M10453_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.523 0.523
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN

NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.492 0.492
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN

NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.492 0.492
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000057241 E2F 64 128

Links

Other E2F family TFs
Other Rattus norvegicus TFs

1001 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O9_06885 Exophiala aquamarina A1O9_06885 I 0.000
ACRE_063340 Acremonium chrysogenum ACRE_063340 I 0.000
AOL_s00215g23 Arthrobotrys oligospora AOL_s00215g23 I 0.000
AUEXF2481DRAFT_200794 Aureobasidium subglaciale AUEXF2481DRAFT_200794 I 0.000
BAUCODRAFT_123202 Baudoinia compniacensis BAUCODRAFT_123202 I 0.000
BBA_05156 Beauveria bassiana BBA_05156 I 0.000
Bcin01g01680 Botrytis cinerea Bcin01g01680 I 0.000
CFIO01_00459 Colletotrichum fioriniae CFIO01_00459 I 0.000
CGGC5_12311 Colletotrichum gloeosporioides CGGC5_12311 I 0.000
CH063_09856 Colletotrichum higginsianum CH063_09856 I 0.000
CHGG_04631 Chaetomium globosum CHGG_04631 I 0.000
clr-1 Neurospora crassa NCU07705 D 0.000
CMQ_3812 Grosmannia clavigera CMQ_3812 I 0.000
Cob_10480 Colletotrichum orbiculare Cob_10480 I 0.000
COCC4DRAFT_82054 Bipolaris maydis COCC4DRAFT_82054 I 0.000
COCCADRAFT_96484 Bipolaris zeicola COCCADRAFT_96484 I 0.000
COCMIDRAFT_79558 Bipolaris oryzae COCMIDRAFT_79558 I 0.000
COCSADRAFT_84232 Bipolaris sorokiniana COCSADRAFT_84232 I 0.000
COCVIDRAFT_30945 Bipolaris victoriae COCVIDRAFT_30945 I 0.000
CPUR_01500 Claviceps purpurea CPUR_01500 I 0.000
CSUB01_02028 Colletotrichum sublineola CSUB01_02028 I 0.000
DOTSEDRAFT_73058 Dothistroma septosporum DOTSEDRAFT_73058 I 0.000
DRE_03937 Drechslerella stenobrocha DRE_03937 I 0.000
estExt_fgenesh1_pg.C_30644 Cryphonectria parasitica estExt_fgenesh1_pg.C_30644 I 0.000
estExt_fgenesh1_pm.C_chr_60224 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_60224 I 0.000
estExt_Genewise1.C_31390 Neurospora discreta estExt_Genewise1.C_31390 I 0.000
estExt_Genewise1Plus.C_160056 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_160056 I 0.000
e_gw1.18.1708.1 Nectria haematococca e_gw1.18.1708.1 I 0.000
F503_05241 Ophiostoma piceae uamh F503_05241 I 0.000
FFUJ_05056 Fusarium fujikuroi FFUJ_05056 I 0.000
FGRRES_17645 Fusarium graminearum FGRRES_17645 I 0.000
FOXG_08626 Fusarium oxysporum FOXG_08626 I 0.000
FPSE_04959 Fusarium pseudograminearum FPSE_04959 I 0.000
FVEG_06046 Fusarium verticillioides FVEG_06046 I 0.000
GGTG_02776 Gaeumannomyces graminis GGTG_02776 I 0.000
GLRG_08331 Colletotrichum graminicola GLRG_08331 I 0.000
H072_3680 Dactylellina haptotyla H072_3680 I 0.000
HMPREF1624_03268 Sporothrix schenckii HMPREF1624_03268 I 0.000
LEMA_P007120.1 Leptosphaeria maculans LEMA_P007120.1 I 0.000
M437DRAFT_69578 Aureobasidium melanogenum M437DRAFT_69578 I 0.000
M438DRAFT_301560 Aureobasidium pullulans M438DRAFT_301560 I 0.000
MAJ_01818 Metarhizium majus MAJ_01818 I 0.000
MAPG_01726 Magnaporthe poae MAPG_01726 I 0.000
MBM_07850 Marssonina brunnea MBM_07850 I 0.000
MBR_00455 Metarhizium brunneum MBR_00455 I 0.000
MGG_01734 Magnaporthe oryzae MGG_01734 I 0.000
MGU_01088 Metarhizium guizhouense MGU_01088 I 0.000
MPH_13649 Macrophomina phaseolina MPH_13649 I 0.000
Mycgr3G100535 Zymoseptoria tritici Mycgr3G100535 I 0.000
MYCTH_2298863 Myceliophthora thermophila MYCTH_2298863 I 0.000
NechaG32419 Fusarium solani NechaG32419 I 0.000
NEUTE1DRAFT_78712 Neurospora tetrasperma NEUTE1DRAFT_78712 I 0.000
OIDMADRAFT_109343 Oidiodendron maius OIDMADRAFT_109343 I 0.000
PFICI_04537 Pestalotiopsis fici PFICI_04537 I 0.000
PODANS_6_2840 Podospora anserina PODANS_6_2840 I 0.000
PTT_14843 Pyrenophora teres PTT_14843 I 0.000
PV09_03439 Verruconis gallopava PV09_03439 I 0.000
S40285_00264 Stachybotrys chlorohalonata S40285_00264 I 0.000
S40288_06279 Stachybotrys chartarum S40288_06279 I 0.000
SAPIO_CDS7108 Scedosporium apiospermum SAPIO_CDS7108 I 0.000
SBOR_2384 Sclerotinia borealis SBOR_2384 I 0.000
SEPMUDRAFT_163837 Sphaerulina musiva SEPMUDRAFT_163837 I 0.000
SETTUDRAFT_20488 Setosphaeria turcica SETTUDRAFT_20488 I 0.000
SMAC_00847 Sordaria macrospora SMAC_00847 I 0.000
SNOG_03108 Stagonospora nodorum SNOG_03108 I 0.000
SPBR_01382 Sporothrix brasiliensis SPBR_01382 I 0.000
SS1G_13144 Sclerotinia sclerotiorum SS1G_13144 I 0.000
THITE_2115249 Thielavia terrestris THITE_2115249 I 0.000
UCREL1_3643 Eutypa lata UCREL1_3643 I 0.000
UCRNP2_7317 Neofusicoccum parvum UCRNP2_7317 I 0.000
V499_08273 Pseudogymnoascus pannorum V499_08273 I 0.000
VDBG_00821 Verticillium alfalfae VDBG_00821 I 0.000
VDBG_00821 Verticillium albo atrum VDBG_00821 I 0.000
VHEMI03626 Torrubiella hemipterigena VHEMI03626 I 0.000