ORUFI02G33610 (Oryza rufipogon)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 ORUFI02G33610 T173376_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
E2FE
M01958_2.00
Arabidopsis thaliana
HDSGCGCSHD

HDSGCGCSHD
PBM
Weirauch et al.(2014)
pTH8176
0.743 0.743
E2FE
M06873_2.00
Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN

NHHNWNWWTTTCCCGCCAAAA
Dap-seq
OMalley et al.(2016)
DEL1_col_a
0.743 0.743
E2FE
M06874_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA

TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL1_colamp_a
0.743 0.743
E2FD
M06875_2.00
Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW

WTTTCCCGCCAAAAHHDWWH
Dap-seq
OMalley et al.(2016)
DEL2_col_a
0.632 0.632
E2FD
M06876_2.00
Arabidopsis thaliana
DTTTTGGCGGGAAAA

TTTTCCCGCCAAAAH
Dap-seq
OMalley et al.(2016)
DEL2_colamp_a
0.632 0.632
E2FD
M10442_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L1_Q2
0.632 0.632
E2FD
M10443_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$E2L_Q2
0.632 0.632
E2F7
M02960_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Jolma et al.(2013)
E2F7_1
0.581 0.581
E2F7
M04705_2.00
Homo sapiens
WTTTGGCGGGAAAN

NTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX
0.581 0.581
E2F7
M09033_2.00
Homo sapiens
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B
0.581 0.581
E2f7
M09040_2.00
Mus musculus
NDGGCGGGRRNDV

BHNYYCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C
0.581 0.581
E2F7
M09522_2.00
Homo sapiens
NSGCGSGAAMNN

NNKTTCSCGCSN
Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673
0.581 0.581
E2F7
M04706_2.00
Homo sapiens
WTTTGGCGGGAAAH

DTTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX
0.581 0.581
E2F8
M02959_2.00
Homo sapiens
TTTGGCGGGAAA

TTTCCCGCCAAA
SELEX
Jolma et al.(2013)
E2F8_1
0.574 0.574
E2F8
M04703_2.00
Homo sapiens
WDKTGGCGGGARNN

NNYTCCCGCCAMHW
SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX
0.574 0.574
E2F8
M04704_2.00
Homo sapiens
WTTTGGCGGGAAWN

NWTTCCCGCCAAAW
SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX
0.574 0.574
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI02G33610.1 E2F 55 119
ORUFI02G33610.1 E2F 200 279
ORUFI02G33610.2 E2F 55 119
ORUFI02G33610.2 E2F 200 279

Links

Other E2F family TFs
Other Oryza rufipogon TFs

330 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010513 Aedes aegypti AAEL010513 N 0.000
AALB008521 Anopheles albimanus AALB008521 N 0.000
AARA009954 Anopheles arabiensis AARA009954 N 0.000
AATE005610 Anopheles atroparvus AATE005610 N 0.000
ACHR005048 Anopheles christyi ACHR005048 N 0.000
ACOM034790 Anopheles coluzzii ACOM034790 N 0.000
ACUA011673 Anopheles culicifacies ACUA011673 N 0.000
ADIR006549 Anopheles dirus ADIR006549 N 0.000
AEPI004207 Anopheles epiroticus AEPI004207 N 0.000
AFAF005439 Anopheles farauti AFAF005439 N 0.000
AFUN010892 Anopheles funestus AFUN010892 N 0.000
AGAP003844 Anopheles gambiae AGAP003844 N 0.000
AMAM016105 Anopheles maculatus AMAM016105 N 0.000
AMEC021851 Anopheles melas AMEC021851 N 0.000
AMIN004071 Anopheles minimus AMIN004071 N 0.000
AQUA001375 Anopheles quadriannulatus AQUA001375 N 0.000
ASTEI00771 Anopheles stephensi ASTEI00771 N 0.000