Thhalv10014274m.g (Eutrema salsugineum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Thhalv10014274m.g T174025_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN

NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.603 0.603
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN

NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.603 0.603
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW

WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.588 0.588
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10014274m E2F 48 131

Links

Other E2F family TFs
Other Eutrema salsugineum TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_013_00134 Aquilegia coerulea Aquca_013_00134 N 0.000
Aquca_037_00095 Aquilegia coerulea Aquca_037_00095 N 0.000
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.000
TCL1 Arabidopsis lyrata fgenesh2_kg.4__1015__AT2G30432.1 N 0.000
scaffold_401530.1 Arabidopsis lyrata scaffold_401530.1 N 0.000
TCL2 Arabidopsis lyrata scaffold_401531.1 N 0.000
TRY Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001350 N 0.000
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N 0.000
ETC1 Arabidopsis thaliana AT1G01380 N 0.000
TCL2 Arabidopsis thaliana AT2G30424 N 0.000
TCL1 Arabidopsis thaliana AT2G30432 N 0.000
CPC Arabidopsis thaliana AT2G46410 N 0.000
ETC3 Arabidopsis thaliana AT4G01060 N 0.000
TRY Arabidopsis thaliana AT5G53200 N 0.000
Bostr.13158s0169 Boechera stricta Bostr.13158s0169 N 0.000
Bostr.24513s0195 Boechera stricta Bostr.24513s0195 N 0.000
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.000
Bostr.25993s0128 Boechera stricta Bostr.25993s0128 N 0.000
Bostr.26833s0960 Boechera stricta Bostr.26833s0960 N 0.000
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N 0.000
Bo4g009260 Brassica oleracea Bo4g009260 N 0.000
Bo9g110930 Brassica oleracea Bo9g110930 N 0.000
Bo4g197120 Brassica oleracea Bo4g197120 N 0.000
Bo3g039260 Brassica oleracea Bo3g039260 N 0.000
Bo3g022870 Brassica oleracea Bo3g022870 N 0.000
Bo2g098940 Brassica oleracea Bo2g098940 N 0.000
Bo9g003750 Brassica oleracea Bo9g003750 N 0.000
Bra004539 Brassica rapa Bra004539 N 0.000
Bra000941 Brassica rapa Bra000941 N 0.000
Bra008539 Brassica rapa Bra008539 N 0.000
Bra026297 Brassica rapa Bra026297 N 0.000
Bra037388 Brassica rapa Bra037388 N 0.000
Bra039283 Brassica rapa Bra039283 N 0.000
Cagra.0084s0067 Capsella grandiflora Cagra.0084s0067 N 0.000
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N 0.000
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.000
Cagra.0050s0058 Capsella grandiflora Cagra.0050s0058 N 0.000
Carubv10024393m.g Capsella rubella Carubv10024393m.g N 0.000
Carubv10027412m.g Capsella rubella Carubv10027412m.g N 0.000
Carubv10024964m.g Capsella rubella Carubv10024964m.g N 0.000
Carubv10003403m.g Capsella rubella Carubv10003403m.g N 0.000
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.000
Carubv10024406m.g Capsella rubella Carubv10024406m.g N 0.000
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N 0.000
Ca_15029 Cicer arietinum Ca_15029 N 0.000
Cla011563 Citrullus lanatus Cla011563 N 0.000
Ciclev10024111m.g Citrus clementina Ciclev10024111m.g N 0.000
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.000
orange1.1g034546m.g Citrus sinensis orange1.1g034546m.g N 0.000
Cucsa.201970 Cucumis sativus Cucsa.201970 N 0.000
Eucgr.D02360 Eucalyptus grandis Eucgr.D02360 N 0.000
Eucgr.E00069 Eucalyptus grandis Eucgr.E00069 N 0.000
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.000
Thhalv10015741m.g Eutrema salsugineum Thhalv10015741m.g N 0.000
Thhalv10009233m.g Eutrema salsugineum Thhalv10009233m.g N 0.000
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N 0.000
Thhalv10001695m.g Eutrema salsugineum Thhalv10001695m.g N 0.000
gene19217-v1.0-hybrid Fragaria vesca gene19217-v1.0-hybrid N 0.000
GLYMA11G02061 Glycine max GLYMA11G02061 N 0.000
GLYMA01G43435 Glycine max GLYMA01G43435 N 0.000
Gorai.007G107400 Gossypium raimondii Gorai.007G107400 N 0.000
Gorai.001G155700 Gossypium raimondii Gorai.001G155700 N 0.000
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.000
MDP0000141474 Malus domestica MDP0000141474 N 0.000
MDP0000583070 Malus domestica MDP0000583070 N 0.000
cassava46504.m1 Manihot esculenta cassava46504.m1 N 0.000
cassava32987.m1 Manihot esculenta cassava32987.m1 N 0.000
MTR_5g009460 Medicago truncatula MTR_5g009460 N 0.000
GSMUA_Achr8G19880_001 Musa acuminata GSMUA_Achr8G19880_001 N 0.000
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N 0.000
POPTR_0002s17030 Populus trichocarpa POPTR_0002s17030 N 0.000
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.000
Pm018400 Prunus mume Pm018400 N 0.000
PRUPE_ppa023853mg Prunus persica PRUPE_ppa023853mg N 0.000
30169.m006531 Ricinus communis 30169.m006531 N 0.000
29742.m001447 Ricinus communis 29742.m001447 N 0.000
SapurV1A.2893s0010 Salix purpurea SapurV1A.2893s0010 N 0.000
SapurV1A.2295s0020 Salix purpurea SapurV1A.2295s0020 N 0.000
SapurV1A.0190s0070 Salix purpurea SapurV1A.0190s0070 N 0.000
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.000
Solyc01g095640.1 Solanum lycopersicum Solyc01g095640.1 N 0.000
PGSC0003DMG400000212 Solanum tuberosum PGSC0003DMG400000212 N 0.000
TCM_016428 Theobroma cacao TCM_016428 N 0.000
TCM_005177 Theobroma cacao TCM_005177 N 0.000
VIT_15s0046g01130 Vitis vinifera VIT_15s0046g01130 N 0.000
VIT_16s0050g02530 Vitis vinifera VIT_16s0050g02530 N 0.000