EBF3 (Bos taurus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSBTAG00000008272 T174493_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
1.000 1.000
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
1.000 1.000
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
1.000 1.000
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
1.000 1.000
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.984 0.984
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.984 0.984
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.968 0.968
EBF2
M10466_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_02
0.968 0.968
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.889 0.889
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000010887 EBF1 1 63

Links

Other EBF1 family TFs
Other Bos taurus TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.000
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.000
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.000
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.000
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.000
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.000
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.000
ZAT6 Arabidopsis thaliana AT5G04340 D 0.000
AZF1 Arabidopsis thaliana AT5G67450 D 0.000
AZF3 Arabidopsis thaliana AT5G43170 I 0.000
ZAT1 Arabidopsis thaliana AT1G02030 D 0.000
ZAT10 Arabidopsis thaliana AT1G27730 D 0.000
ZAT9 Arabidopsis thaliana AT3G60580 D 0.000
AZF2 Arabidopsis thaliana AT3G19580 D 0.000
ZAT4 Arabidopsis thaliana AT2G45120 D 0.000
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.000
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.000
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.000
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.000
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.000
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.000
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.000
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.000
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.000
BRADI1G16010 Brachypodium distachyon BRADI1G16010 I 0.000
Bo2g168030 Brassica oleracea Bo2g168030 I 0.000
Bo7g048650 Brassica oleracea Bo7g048650 I 0.000
Bo9g181170 Brassica oleracea Bo9g181170 I 0.000
Bo8g095300 Brassica oleracea Bo8g095300 I 0.000
Bo7g065200 Brassica oleracea Bo7g065200 I 0.000
Bo6g077190 Brassica oleracea Bo6g077190 I 0.000
Bo5g113850 Brassica oleracea Bo5g113850 I 0.000
Bo4g195370 Brassica oleracea Bo4g195370 I 0.000
Bo4g104940 Brassica oleracea Bo4g104940 I 0.000
Bo3g142840 Brassica oleracea Bo3g142840 I 0.000
Bo1g113530 Brassica oleracea Bo1g113530 I 0.000
Bo1g081350 Brassica oleracea Bo1g081350 I 0.000
Bo9g019120 Brassica oleracea Bo9g019120 I 0.000
Bra000372 Brassica rapa Bra000372 I 0.000
Bra007545 Brassica rapa Bra007545 I 0.000
Bra014483 Brassica rapa Bra014483 I 0.000
Bra040325 Brassica rapa Bra040325 I 0.000
Bra009464 Brassica rapa Bra009464 I 0.000
Bra010922 Brassica rapa Bra010922 I 0.000
Bra012914 Brassica rapa Bra012914 I 0.000
Bra003422 Brassica rapa Bra003422 I 0.000
Bra018817 Brassica rapa Bra018817 I 0.000
Bra022436 Brassica rapa Bra022436 I 0.000
Bra029985 Brassica rapa Bra029985 I 0.000
Bra031834 Brassica rapa Bra031834 I 0.000
Bra033666 Brassica rapa Bra033666 I 0.000
Bra037845 Brassica rapa Bra037845 I 0.000
Bra038219 Brassica rapa Bra038219 I 0.000
PK10188.1 Cannabis sativa PK10188.1 I 0.000
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.000
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.000
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.000
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.000
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.000
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.000
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.000
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.000
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.000
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.000
Ca_23672 Cicer arietinum Ca_23672 I 0.000
Ca_18364 Cicer arietinum Ca_18364 I 0.000
Ca_01586 Cicer arietinum Ca_01586 I 0.000
Cla022966 Citrullus lanatus Cla022966 I 0.000
Cla001400 Citrullus lanatus Cla001400 I 0.000
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.000
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.000
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.000
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.000
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.000
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.000
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.000
Cucsa.395710 Cucumis sativus Cucsa.395710 I 0.000
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.000
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.000
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.000
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.000
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.000
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.000
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.000
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.000
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.000
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I 0.000
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.000
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.000
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.000
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.000
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.000
GLYMA11G15140 Glycine max GLYMA11G15140 I 0.000
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.000
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.000
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.000
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.000
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.000
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.000
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.000
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.000
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.000
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.000
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.000
MLOC_70662 Hordeum vulgare MLOC_70662 I 0.000
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.000
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.000
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.000
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.000
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.000
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.000
MDP0000198015 Malus domestica MDP0000198015 I 0.000
MDP0000319225 Malus domestica MDP0000319225 I 0.000
MDP0000762756 Malus domestica MDP0000762756 I 0.000
MDP0000573176 Malus domestica MDP0000573176 I 0.000
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.000
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.000
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.000
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.000
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.000
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.000
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.000
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.000
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.000
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.000
MTR_2g096540 Medicago truncatula MTR_2g096540 I 0.000
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.000
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.000
mgf021094m Mimulus guttatus mgf021094m I 0.000
mgf017082m Mimulus guttatus mgf017082m I 0.000
mgf006006m Mimulus guttatus mgf006006m I 0.000
GSMUA_AchrUn_randomG03030_001 Musa acuminata GSMUA_AchrUn_randomG03030_001 I 0.000
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.000
GSMUA_Achr4G12160_001 Musa acuminata GSMUA_Achr4G12160_001 I 0.000
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.000
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.000
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.000
OBART04G21020 Oryza barthii OBART04G21020 I 0.000
OB03G42170 Oryza brachyantha OB03G42170 I 0.000
OB04G28040 Oryza brachyantha OB04G28040 I 0.000
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.000
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.000
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.000
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.000
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.000
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.000
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.000
OS04G0552700 Oryza sativa OS04G0552700 I 0.000
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.000
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.000
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.000
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.000
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.000
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.000
Pm021284 Prunus mume Pm021284 I 0.000
Pm005390 Prunus mume Pm005390 I 0.000
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.000
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.000
30170.m013751 Ricinus communis 30170.m013751 I 0.000
30174.m008818 Ricinus communis 30174.m008818 I 0.000
30147.m014242 Ricinus communis 30147.m014242 I 0.000
28152.m000908 Ricinus communis 28152.m000908 I 0.000
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.000
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.000
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.000
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.000
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.000
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.000
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.000
Si010615m.g Setaria italica Si010615m.g I 0.000
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.000
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.000
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.000
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.000
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.000
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.000
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.000
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.000
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I 0.000
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.000
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.000
TCM_000780 Theobroma cacao TCM_000780 I 0.000
TCM_034720 Theobroma cacao TCM_034720 I 0.000
TCM_007214 Theobroma cacao TCM_007214 I 0.000
TCM_014903 Theobroma cacao TCM_014903 I 0.000
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.000
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.000
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.000
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.000
GRMZM2G455889 Zea mays GRMZM2G455889 I 0.000
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.000
AC211702.2_FG002 Zea mays AC211702.2_FG002 I 0.000