EBF1 (Cavia porcellus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSCPOG00000026184 T174513_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.987 0.987
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.987 0.987
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.987 0.987
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.939 0.939
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.866 0.866
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.861 0.861
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.840 0.840
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV

BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000018411 EBF1 17 249
ENSCPOP00000019058 EBF1 17 247

Links

Other EBF1 family TFs
Other Cavia porcellus TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL003436 Aedes aegypti AAEL003436 I 0.789
AALB010330 Anopheles albimanus AALB010330 I 0.743
Aan_R007097 Calypte anna Aan_R007097 I 0.918
Aan_R009520 Calypte anna Aan_R009520 I 0.887
ACOM041538 Anopheles coluzzii ACOM041538 I 0.770
Afo_R002906 Aptenodytes forsteri Afo_R002906 I 0.792
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.844
AGAP011437 Anopheles gambiae AGAP011437 I 0.836
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 1.000
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.848
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.799
AMEM016790 Anopheles merus AMEM016790 I 0.770
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.885
ASU_01180 Ascaris suum ASU_01180 I 0.739
Bm6296 Brugia malayi Bm6296 I 0.714
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.871
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
CapteG93575 Capitella teleta CapteG93575 I 0.779
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.771
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.939
D917_06660 Trichinella nativa D917_06660 I 0.736
DAPPUDRAFT_22285 Daphnia pulex DAPPUDRAFT_22285 I 0.843
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.973
EBF1 Microcebus murinus ENSMICG00000010036 I 0.857
EBF1 Equus caballus ENSECAG00000007964 I 1.000
Ebf1 Mus musculus ENSMUSG00000057098 D 0.987
EBF1 Echinops telfairi ENSETEG00000011711 I 0.987
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.987
EBF1 Gallus gallus ENSGALG00000003699 I 0.978
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.931
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.827
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.922
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.905
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.948
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.987
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.948
EBF1 Felis catus ENSFCAG00000008547 I 0.874
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.987
EBF1 Bos taurus ENSBTAG00000037508 I 0.987
EBF1 Oryzias latipes ENSORLG00000007471 I 0.939
EBF1 Canis familiaris ENSCAFG00000017318 I 0.996
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.987
EBF1 Procavia capensis ENSPCAG00000013495 I 0.920
EBF1 Homo sapiens ENSG00000164330 D 0.987
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.987
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.987
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.987
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.978
EBF1 Oryzias latipes ENSORLG00000002342 I 0.900
ebf1a Danio rerio ENSDARG00000099849 I 0.952
ebf1b Danio rerio ENSDARG00000069196 I 0.935
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.814
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.844
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.844
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.844
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.840
EBF2 Sus scrofa ENSSSCG00000009655 I 0.844
ebf2 Oryzias latipes ENSORLG00000006408 I 0.823
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.844
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.844
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.844
Ebf2 Mus musculus ENSMUSG00000022053 D 0.840
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.844
EBF2 Monodelphis domestica ENSMODG00000016702 I 0.771
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.840
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.861
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.818
ebf2 Danio rerio ENSDARG00000042525 I 0.784
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.844
EBF2 Equus caballus ENSECAG00000014179 I 0.844
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.836
EBF2 Canis familiaris ENSCAFG00000008918 I 0.844
EBF2 Felis catus ENSFCAG00000003607 I 0.778
EBF2 Gallus gallus ENSGALG00000000242 I 0.844
EBF2 Bos taurus ENSBTAG00000040390 I 0.844
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.840
EBF2 Homo sapiens ENSG00000221818 D 0.844
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.818
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.836
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.831
ebf2.S Xenopus laevis XB-GENE-971141 I 0.831
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.905
Ebf3 Mus musculus ENSMUSG00000010476 I 0.939
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.935
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.974
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.931
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.788
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.939
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 1.000
EBF3 Homo sapiens ENSG00000108001 D 0.939
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.923
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.939
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.939
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.935
EBF3 Echinops telfairi ENSETEG00000014060 I 0.784
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.939
ebf3.L Xenopus laevis XB-GENE-962547 I 0.922
ebf3a Danio rerio ENSDARG00000100244 I 0.931
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.896
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.896
ebf3a Oryzias latipes ENSORLG00000005870 I 0.905
ebf3b Danio rerio ENSDARG00000091287 I 0.766
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.788
EBF4 Sus scrofa ENSSSCG00000007171 I 0.788
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.861
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.957
EBF4 Oryzias latipes ENSORLG00000020414 I 0.892
Ebf4 Mus musculus ENSMUSG00000053552 D 0.861
EBF4 Procavia capensis ENSPCAG00000011947 I 0.847
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.784
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.788
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.866
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.758
EBF4 Felis catus ENSFCAG00000014453 I 0.810
EBF4 Equus caballus ENSECAG00000010003 I 0.861
EBF4 Homo sapiens ENSG00000088881 D 0.941
EBF4 Canis familiaris ENSCAFG00000006631 I 0.866
EBF4 Bos taurus ENSBTAG00000037757 I 0.866
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.874
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.896
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.719
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.866
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.788
EBF4 Dasypus novemcinctus ENSDNOG00000049548 I 0.810
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.866
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.784
EFV50386 Trichinella spiralis EFV50386 I 0.736
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.804
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.844
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.955
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.987
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.870
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.909
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.931
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.730
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.844
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.973
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.792
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.762
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.792
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.974
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.863
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.710
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.939
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.978
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.844
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.887
ENSGMOG00000010328 Gadus morhua ENSGMOG00000010328 I 0.725
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.935
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.900
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.831
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.965
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.913
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.939
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.961
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.827
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.884
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.844
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.866
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.714
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.749
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.957
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.844
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.857
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.844
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.732
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.905
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.922
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.896
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.823
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.939
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.892
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.940
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.775
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.836
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.806
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 1.000
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.883
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.844
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.939
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.892
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.767
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.827
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.905
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.905
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.918
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.866
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.987
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.844
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.939
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.836
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.794
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.900
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.935
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.732
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.840
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.900
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.892
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.840
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.905
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.818
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.732
GB42304 Apis mellifera GB42304 I 0.727
GE12286 Drosophila yakuba FBgn0230042 I 0.736
GF11778 Drosophila ananassae FBgn0088818 I 0.732
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.887
GG22397 Drosophila erecta FBgn0114569 I 0.736
GH12956 Drosophila grimshawi FBgn0120434 I 0.825
GH20479 Drosophila grimshawi FBgn0127942 I 0.732
GH25280 Drosophila grimshawi FBgn0132735 I 0.722
GI21022 Drosophila mojavensis FBgn0143754 I 0.723
GJ21945 Drosophila virilis FBgn0209060 I 0.732
GK23295 Drosophila willistoni FBgn0225257 I 0.732
GL10656 Drosophila persimilis FBgn0148266 I 0.732
GM20182 Drosophila sechellia FBgn0175065 I 0.736
HelroG112029 Helobdella robusta HelroG112029 I 0.745
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.765
KGM_09934 Danaus plexippus KGM_09934 I 0.762
kn Drosophila melanogaster FBgn0001319 D 0.736
L596_g20342 Steinernema carpocapsae L596_g20342 I 0.714
L798_15574 Zootermopsis nevadensis L798_15574 I 0.740
L889_g1820 Steinernema feltiae L889_g1820 I 0.710
L893_g31120 Steinernema glaseri L893_g31120 I 0.701
L898_g8304 Steinernema monticolum L898_g8304 I 0.710
LCUP013861 Lucilia cuprina LCUP013861 I 0.763
LOAG_18199 Loa loa LOAG_18199 I 0.714
LotgiG225788 Lottia gigantea LotgiG225788 I 0.801
MCINX016126 Melitaea cinxia MCINX016126 I 0.825
MDOA011385 Musca domestica MDOA011385 I 0.753
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 1.000
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.781
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.840
nAv.1.0.1.g03521 Acanthocheilonema viteae nAv.1.0.1.g03521 I 0.730
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.714
nLs.2.1.2.g08363 Litomosoides sigmodontis nLs.2.1.2.g08363 I 0.719
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.723
NV10306 Nasonia vitripennis NV10306 I 0.786
PHUM119360 Pediculus humanus PHUM119360 I 0.766
PTRK_0001642500 Parastrongyloides trichosuri PTRK_0001642500 I 0.727
Pvit_12046 Pogona vitticeps Pvit_12046 I 1.000
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.900
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.952
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
SMAR000842 Strigamia maritima SMAR000842 I 0.790
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.723
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.750
SPAL_0001132500 Strongyloides papillosus SPAL_0001132500 I 0.723
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.775
SSTP_0000472000 Strongyloides stercoralis SSTP_0000472000 I 0.727
SVE_0119400 Strongyloides venezuelensis SVE_0119400 I 0.723
TC001270 Tribolium castaneum TC001270 I 0.766
TCLT_0000613901 Thelazia callipaeda TCLT_0000613901 I 0.772
TTRE_0000372001 Trichuris trichiura TTRE_0000372001 I 0.749
unc-3 Caenorhabditis elegans WBGene00006743 I 0.716
WBGene00240610 Onchocerca volvulus WBGene00240610 I 0.701