CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G140600
(
Gossypium raimondii
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04873 (EIN3)
IPR006957
Gorai.003G140600
T175356_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT
ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.927
0.927
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.915
0.915
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.915
0.915
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR
YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.915
0.915
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.906
0.906
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.837
0.837
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.703
0.703
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G140600.1
EIN3
53
300
DELERRMWRDKMRLKRLKEQNKSKDGVDIVKQRQSQEQARKKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQANNSIPGNNDGCNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVHPPWWPTGNEEWWPHLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE
Gorai.003G140600.2
EIN3
53
300
DELERRMWRDKMRLKRLKEQNKSKDGVDIVKQRQSQEQARKKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQANNSIPGNNDGCNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVHPPWWPTGNEEWWPHLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE
Gorai.003G140600.3
EIN3
53
300
DELERRMWRDKMRLKRLKEQNKSKDGVDIVKQRQSQEQARKKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQANNSIPGNNDGCNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVHPPWWPTGNEEWWPHLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE
Links
Other
EIN3
family TFs
Other
Gossypium raimondii
TFs
173 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy