CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Gb01550
(
Panicum virgatum
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04873 (EIN3)
IPR006957
Pavir.Gb01550
T175396_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb01550.1.p
EIN3
64
328
ADLKKRMWKDQLLLMKLEGRSGRDRGPHPGDGHHQQHQQPAQDQMLASASSKDMEESPENRYRRKAMLRAQDGVIRHMLKMMEACNARGFVYGVVGEDGVPVSGSSDSLRGWWKDDVGFDRAGPLALLAGHQEPGSPMAASFLHGLHDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLAPPWWPTGQEPWWGTQGEAQAHQGAPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDAETWSRVIAQEE
Pavir.Gb01550.2.p
EIN3
64
328
ADLKKRMWKDQLLLMKLEGRSGRDRGPHPGDGHHQQHQQPAQDQMLASASSKDMEESPENRYRRKAMLRAQDGVIRHMLKMMEACNARGFVYGVVGEDGVPVSGSSDSLRGWWKDDVGFDRAGPLALLAGHQEPGSPMAASFLHGLHDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLAPPWWPTGQEPWWGTQGEAQAHQGAPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDAETWSRVIAQEE
Links
Other
EIN3
family TFs
Other
Panicum virgatum
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si009909m.g
Setaria italica
Si009909m.g
N
0.895
GRMZM2G044322
Zea mays
GRMZM2G044322
N
0.865
Sb06g018710
Sorghum bicolor
Sb06g018710
N
0.850
OPUNC04G12540
Oryza punctata
OPUNC04G12540
N
0.818
LPERR04G11520
Leersia perrieri
LPERR04G11520
N
0.817
OGLUM04G14540
Oryza glumaepatula
OGLUM04G14540
N
0.810
ORUFI04G16070
Oryza rufipogon
ORUFI04G16070
N
0.808
OMERI04G13070
Oryza meridionalis
OMERI04G13070
N
0.808
ONIVA04G12810
Oryza nivara
ONIVA04G12810
N
0.808
BGIOSGA016530
Oryza indica
BGIOSGA016530
N
0.806
BRADI5G12127
Brachypodium distachyon
BRADI5G12127
N
0.802
ORGLA04G0116800
Oryza glaberrima
ORGLA04G0116800
N
0.802
MLOC_13416
Hordeum vulgare
MLOC_13416
N
0.802
F775_13449
Aegilops tauschii
F775_13449
N
0.798
Traes_2BL_7BE6FCE7D
Triticum aestivum
Traes_2BL_7BE6FCE7D
N
0.798
TRIUR3_20987
Triticum urartu
TRIUR3_20987
N
0.797
Traes_2AL_C76F4E089
Triticum aestivum
Traes_2AL_C76F4E089
N
0.793
BRADI3G46680
Brachypodium distachyon
BRADI3G46680
N
0.769
OS04G0456900
Oryza sativa
OS04G0456900
N
0.768
OPUNC02G19370
Oryza punctata
OPUNC02G19370
N
0.764
BGIOSGA008478
Oryza indica
BGIOSGA008478
N
0.757
ONIVA02G23720
Oryza nivara
ONIVA02G23720
N
0.757
ORUFI02G22630
Oryza rufipogon
ORUFI02G22630
N
0.753
OGLUM02G21750
Oryza glumaepatula
OGLUM02G21750
N
0.753
ORGLA02G0186100
Oryza glaberrima
ORGLA02G0186100
N
0.753
OMERI02G21100
Oryza meridionalis
OMERI02G21100
N
0.745
LPERR02G17460
Leersia perrieri
LPERR02G17460
N
0.745
Sb04g023730
Sorghum bicolor
Sb04g023730
N
0.745
Pavir.Aa01600
Panicum virgatum
Pavir.Aa01600
N
0.744
F775_15862
Aegilops tauschii
F775_15862
N
0.741
Pavir.Ab01993
Panicum virgatum
Pavir.Ab01993
N
0.741
TRAES3BF114600150CFD_g
Triticum aestivum
TRAES3BF114600150CFD_g
N
0.740
AC210616.4_FG005
Zea mays
AC210616.4_FG005
N
0.740
Si017107m.g
Setaria italica
Si017107m.g
N
0.736
BRADI3G46690
Brachypodium distachyon
BRADI3G46690
N
0.736
Traes_6DL_10077D5F6
Triticum aestivum
Traes_6DL_10077D5F6
N
0.729
GRMZM2G040481
Zea mays
GRMZM2G040481
N
0.717