fgenesh_masked-pve_contig_72-abinit-gene-0.105 (Pythium vexans)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 fgenesh_masked-pve_contig_72-abinit-gene-0.105 T179349_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This intronless gene encodes a member of the SRY-related HMG-box (SOX) family of transcription factors involved in the regulation of embryonic development and in the determination of cell fate. The product of this gene is required for stem-cell maintenance in the central nervous system, and also regulates gene expression in the stomach. Mutations in this gene have been associated with optic nerve hypoplasia and with syndromic microphthalmia, a severe form of structural eye malformation. This gene lies within an intron of another gene called SOX2 overlapping transcript (SOX2OT). [provided by RefSeq, Jul 2008]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPV00000015168 FAR1 81 166

Links

Other FAR1 family TFs
Other Pythium vexans TFs

Invalid Input OrderBy

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action