CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava23935.valid.m1
(
Manihot esculenta
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
cassava23935.valid.m1
T181039_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava23935.valid.m1
FAR1
80
168
IFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRREGNENRSKRQRTITRVGCKAQMTVKKQSSGKWVVTKLIKEHNHDLVP
Links
Other
FAR1
family TFs
Other
Manihot esculenta
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_18s0122g00530
Vitis vinifera
VIT_18s0122g00530
N
0.944
POPTR_0005s27900
Populus trichocarpa
POPTR_0005s27900
N
0.921
Ciclev10000383m.g
Citrus clementina
Ciclev10000383m.g
N
0.921
evm.TU.contig_24967.4
Carica papaya
evm.TU.contig_24967.4
N
0.921
orange1.1g004450m.g
Citrus sinensis
orange1.1g004450m.g
N
0.921
SapurV1A.0554s0220
Salix purpurea
SapurV1A.0554s0220
N
0.921
PRUPE_ppa026999mg
Prunus persica
PRUPE_ppa026999mg
N
0.899
gene29166-v1.0-hybrid
Fragaria vesca
gene29166-v1.0-hybrid
N
0.899
MDP0000722905
Malus domestica
MDP0000722905
N
0.888
TCM_034806
Theobroma cacao
TCM_034806
N
0.865
Eucgr.F03610
Eucalyptus grandis
Eucgr.F03610
N
0.787
Aquca_007_00963
Aquilegia coerulea
Aquca_007_00963
N
0.764
Aquca_780_00002
Aquilegia coerulea
Aquca_780_00002
N
0.708
Aquca_095_00021
Aquilegia coerulea
Aquca_095_00021
N
0.708