CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J38022
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J38022
T181892_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J38022.1.p
FAR1
308
399
EYYNLYSWECGFGIRWGKKRWSENRRKNNGPEAKPYQLSQDFYCSCRGKPDGNVKTSSSKTGCKAMLRVHRTSDDGWIVVEHISEHNHPLSE
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J08534
Panicum virgatum
Pavir.J08534
N
0.855
Pavir.J37340
Panicum virgatum
Pavir.J37340
N
0.843
Pavir.J00904
Panicum virgatum
Pavir.J00904
N
0.819
Pavir.J04136
Panicum virgatum
Pavir.J04136
N
0.767
Pavir.J34242
Panicum virgatum
Pavir.J34242
N
0.762
Pavir.Ea03353
Panicum virgatum
Pavir.Ea03353
N
0.728
Pavir.J20691
Panicum virgatum
Pavir.J20691
N
0.705