CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMEG00000007498
(
Ailuropoda melanoleuca
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSAMEG00000007498
T185125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.789
0.986
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.789
0.986
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.756
0.946
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.767
0.951
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.707
0.580
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.703
0.622
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.707
0.580
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.703
0.622
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.703
0.622
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.703
0.622
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.703
0.622
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.703
0.622
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.703
0.622
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.703
0.622
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.703
0.622
FOXD4L4
M10564_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.701
0.580
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.689
0.554
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.699
0.593
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.699
0.593
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.699
0.593
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.699
0.593
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.699
0.593
FOXD3
M10566_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.699
0.593
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.699
0.593
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.687
0.649
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.692
0.580
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.687
0.635
bin
M03752_2.00
Drosophila melanogaster
HTAATGTAAACAAW
WTTGTTTACATTAD
SELEX
Nitta et al.(2015)
bin_1
0.687
0.667
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.687
0.635
bin
M06199_2.00
Drosophila melanogaster
TAAACARVGA
TCBYTGTTTA
B1H
Zhu et al.(2011)
bin_FlyReg_FBgn0045759
0.687
0.667
bin
M06200_2.00
Drosophila melanogaster
RTAAACA
TGTTTAY
B1H
Zhu et al.(2011)
bin_SANGER_5_FBgn0045759
0.687
0.667
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.687
0.635
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.687
0.556
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.671
0.581
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.671
0.581
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.682
0.568
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.682
0.568
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW
WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.671
0.642
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMEP00000007893
Forkhead
121
194
GIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDP
ENSAMEP00000007902
Forkhead
49
118
NSPAXINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADEEG
ENSAMEP00000007904
Forkhead
67
151
GIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSF
Links
Other
Forkhead
family TFs
Other
Ailuropoda melanoleuca
TFs
685 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy