foxk1 (Danio rerio)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSDARG00000037872 T185516_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Foxk1
M00163_2.00
Mus musculus
RWMAACAA

TTGTTKWY
PBM
Badis et al.(2009)
Foxk1_2323
0.857 0.977
Foxk1
M03061_2.00
Mus musculus
CGGACACAATC

GATTGTGTCCG
SELEX
Jolma et al.(2013)
Foxk1_1
0.857 0.977
Foxk1
M03062_2.00
Mus musculus
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
Foxk1_2
0.857 0.977
Foxk1
M09113_2.00
Mus musculus
NNGDMAACAVV

BBTGTTKHCNN
Misc
Kulakovskiy et al.(2013)
FOXK1_MOUSE.H11MO.0.A
0.857 0.977
FOXK1
M01977_2.00
Homo sapiens
NNRWMMAYAN

NTRTKKWYNN
PBM
Weirauch et al.(2014)
pTH6108
0.857 0.965
FOXK1
M03025_2.00
Homo sapiens
CGGACACAAT

ATTGTGTCCG
SELEX
Jolma et al.(2013)
FOXK1_1
0.857 0.965
FOXK1
M04825_2.00
Homo sapiens
NDNRTMAAYAN

NTRTTKAYNHN
SELEX
Yin et al.(2017)
FOXK1_eDBD_HT-SELEX
0.857 0.965
FOXK1
M08120_2.00
Homo sapiens
NNNGTAAACANVNN

NNBNTGTTTACNNN
ChIP-seq
Mathelier et al.(2014)
MA0852.2
0.857 0.965
FOXK1
M09094_2.00
Homo sapiens
VNDRDAAACA

TGTTTHYHNB
Misc
Kulakovskiy et al.(2013)
FOXK1_HUMAN.H11MO.0.A
0.857 0.965
FOXK1
M04826_2.00
Homo sapiens
NWYRYAAWYAD

HTRWTTRYRWN
SELEX
Yin et al.(2017)
FOXK1_eDBD_Methyl-HT-SELEX
0.857 0.965
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN

NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.845 0.907
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN

NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.828 0.872
FOXI1
M03026_2.00
Homo sapiens
GTAAACA

TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.700 0.523
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA

TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.700 0.523
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN

NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.700 0.523
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW

WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.700 0.523
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD

HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.700 0.523
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD

HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.700 0.523
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH

DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.700 0.523
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH

DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.700 0.523
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW

WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.700 0.523
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA

TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.679 0.558
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA

TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.679 0.558
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA

TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.679 0.558
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA

TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.679 0.558
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW

WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.679 0.558
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH

DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.679 0.558
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN

NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.679 0.558
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH

DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.679 0.558
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN

NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.678 0.558
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN

NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.678 0.558
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN

NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.678 0.558
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT

ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.678 0.558
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA

TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.678 0.558
Foxj3
M03057_2.00
Mus musculus
RTAAACAW

WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.678 0.558
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA

TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.678 0.558
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN

NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.678 0.558
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000055200 Forkhead 258 347

Links

Other Forkhead family TFs
Other Danio rerio TFs

600 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0008_2049 Arabidopsis lyrata Al_scaffold_0008_2049 I 0.000
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.000
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001268 I 0.000
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.000
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.000
Bo2g036530 Brassica oleracea Bo2g036530 I 0.000
Bo9g123440 Brassica oleracea Bo9g123440 I 0.000
Bostr.26833s0652 Boechera stricta Bostr.26833s0652 I 0.000
Bra002847 Brassica rapa Bra002847 I 0.000
Bra035604 Brassica rapa Bra035604 I 0.000
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.000
Cagra.3745s0008 Capsella grandiflora Cagra.3745s0008 I 0.000
Carubv10027619m.g Capsella rubella Carubv10027619m.g I 0.000
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.000
Ca_17657 Cicer arietinum Ca_17657 I 0.000
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.000
Cla004524 Citrullus lanatus Cla004524 I 0.000
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.000
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.000
evm.TU.supercontig_12.83 Carica papaya evm.TU.supercontig_12.83 I 0.000
F775_22620 Aegilops tauschii F775_22620 I 0.000
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.000
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.000
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.000
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.000
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.000
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.000
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.000
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.000
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.000
MYB80 Arabidopsis thaliana AT5G56110 D 0.000
OB04G23000 Oryza brachyantha OB04G23000 I 0.000
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.000
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.000
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.000
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.000
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.000
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.000
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.000
Pavir.J28142 Panicum virgatum Pavir.J28142 I 0.000
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.000
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.000
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.000
POPTR_0001s47430 Populus trichocarpa POPTR_0001s47430 I 0.000
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.000
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.000
SapurV1A.0338s0180 Salix purpurea SapurV1A.0338s0180 I 0.000
SapurV1A.0395s0050 Salix purpurea SapurV1A.0395s0050 I 0.000
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.000
Si012130m.g Setaria italica Si012130m.g I 0.000
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.000
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.000
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.000
TCM_030529 Theobroma cacao TCM_030529 I 0.000
Thhalv10015622m.g Eutrema salsugineum Thhalv10015622m.g I 0.000
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.000
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I 0.000
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.000