CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_146565
(
Sphaerulina musiva
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
SEPMUDRAFT_146565
T188487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.750
0.547
FOXK1
M01977_2.00
Homo sapiens
NNRWMMAYAN
NTRTKKWYNN
PBM
Weirauch et al.(2014)
pTH6108
0.742
0.570
Foxk1
M00163_2.00
Mus musculus
RWMAACAA
TTGTTKWY
PBM
Badis et al.(2009)
Foxk1_2323
0.742
0.570
FOXK1
M03025_2.00
Homo sapiens
CGGACACAAT
ATTGTGTCCG
SELEX
Jolma et al.(2013)
FOXK1_1
0.742
0.570
Foxk1
M03061_2.00
Mus musculus
CGGACACAATC
GATTGTGTCCG
SELEX
Jolma et al.(2013)
Foxk1_1
0.742
0.570
Foxk1
M03062_2.00
Mus musculus
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
Foxk1_2
0.742
0.570
FOXK1
M04825_2.00
Homo sapiens
NDNRTMAAYAN
NTRTTKAYNHN
SELEX
Yin et al.(2017)
FOXK1_eDBD_HT-SELEX
0.742
0.570
FOXK1
M08120_2.00
Homo sapiens
NNNGTAAACANVNN
NNBNTGTTTACNNN
ChIP-seq
Mathelier et al.(2014)
MA0852.2
0.742
0.570
FOXK1
M09094_2.00
Homo sapiens
VNDRDAAACA
TGTTTHYHNB
Misc
Kulakovskiy et al.(2013)
FOXK1_HUMAN.H11MO.0.A
0.742
0.570
Foxk1
M09113_2.00
Mus musculus
NNGDMAACAVV
BBTGTTKHCNN
Misc
Kulakovskiy et al.(2013)
FOXK1_MOUSE.H11MO.0.A
0.742
0.570
FOXK1
M04826_2.00
Homo sapiens
NWYRYAAWYAD
HTRWTTRYRWN
SELEX
Yin et al.(2017)
FOXK1_eDBD_Methyl-HT-SELEX
0.742
0.570
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.713
0.535
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.697
0.372
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.697
0.372
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.697
0.372
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.697
0.372
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.697
0.372
NCU00019
M01991_2.00
Neurospora crassa
NNNGTAAAYAHN
NDTRTTTACNNN
PBM
Weirauch et al.(2014)
pTH9655
0.687
0.558
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.677
0.488
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.677
0.488
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.677
0.488
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.677
0.488
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.677
0.488
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.677
0.488
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.677
0.488
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.677
0.488
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.677
0.488
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.671
0.384
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.671
0.384
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.671
0.384
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.671
0.384
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.670
0.384
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.670
0.384
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.670
0.384
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.670
0.384
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.670
0.384
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.670
0.384
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.670
0.384
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.670
0.384
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.670
0.384
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.670
0.384
croc
M03744_2.00
Drosophila melanogaster
WRYGTMAACAH
DTGTTKACRYW
SELEX
Nitta et al.(2015)
croc_1
0.670
0.500
croc
M10571_2.00
Drosophila melanogaster
HWNARTAAATAKNNNV
BNNNMTATTTAYYNWD
Transfac
Matys et al.(2006)
I$CROC_01
0.670
0.500
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF17581
Forkhead
371
460
KPPHSYAQLIGMAILSTQDHQMTLSNIYKWIQANYAFYRFNTGGWQNSIRHNLSLNKAFTKIARRTDEPGKGMKWMIEPTEFDTFVQQGM
Links
Other
Forkhead
family TFs
Other
Sphaerulina musiva
TFs
821 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy