Alligator_sinensis_CCG017175.1 (Alligator sinensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 Alligator_sinensis_CCG017175.1 T188956_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXI1
M03026_2.00 		Homo sapiens
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
FOXI1_1 		0.686 0.867
FOXI1
M03027_2.00 		Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY		 SELEX
Jolma et al.(2013)
FOXI1_2 		0.686 0.867
FOXI1
M04827_2.00 		Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX 		0.686 0.867
FOXI1
M04829_2.00 		Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX 		0.686 0.867
FOXI1
M09095_2.00 		Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B 		0.686 0.867
Foxi1
M09109_2.00 		Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B 		0.686 0.867
FOXI1
M10556_2.00 		Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD		 Transfac
Matys et al.(2006)
V$HFH3_01 		0.686 0.867
FOXI1
M04828_2.00 		Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX 		0.686 0.867
FOXI1
M04830_2.00 		Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX 		0.686 0.867
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG017175.1 Forkhead 1 79

Links

Other Forkhead family TFs
Other Alligator sinensis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007110 Calypte anna Aan_R007110 I 0.721
foxi-a Ciona intestinalis ENSCING00000007221 I 0.717
ENSCSAVG00000005989 Ciona savignyi ENSCSAVG00000005989 I 0.717
ENSOGAG00000028090 Otolemur garnettii ENSOGAG00000028090 I 0.709
ENSGMOG00000019598 Gadus morhua ENSGMOG00000019598 I 0.708
ENSLOCG00000008171 Lepisosteus oculatus ENSLOCG00000008171 I 0.697
FOXS1 Dasypus novemcinctus ENSDNOG00000045647 I 0.692
FOXS1 Equus caballus ENSECAG00000001159 I 0.692
ENSPANG00000006639 Papio anubis ENSPANG00000006639 I 0.692
FOXS1 Otolemur garnettii ENSOGAG00000030777 I 0.692
ENSSTOG00000012148 Ictidomys tridecemlineatus ENSSTOG00000012148 I 0.692
FOXS1 Felis catus ENSFCAG00000001900 I 0.692
FOXS1 Gorilla gorilla ENSGGOG00000023442 I 0.692
ENSPPYG00000010894 Pongo abelii ENSPPYG00000010894 I 0.692
FOXS1 Pan troglodytes ENSPTRG00000013363 I 0.692
FOXS1 Loxodonta africana ENSLAFG00000013119 I 0.692
FOXS1 Pteropus vampyrus ENSPVAG00000006116 I 0.692
FOXS1 Homo sapiens ENSG00000179772 I 0.692
Foxs1 Rattus norvegicus ENSRNOG00000008529 I 0.692
FOXS1 Myotis lucifugus ENSMLUG00000007305 I 0.692
ENSCSAG00000018667 Chlorocebus sabaeus ENSCSAG00000018667 I 0.692
ENSAMXG00000005839 Astyanax mexicanus ENSAMXG00000005839 I 0.692
FOXS1 Bos taurus ENSBTAG00000009206 I 0.692
ENSAMEG00000018773 Ailuropoda melanoleuca ENSAMEG00000018773 I 0.692
Myotis_brandtii_FOXS1_10023769 Myotis brandtii Myotis_brandtii_FOXS1_10023769 I 0.692
Foxs1 Mus musculus ENSMUSG00000074676 I 0.692
ENSOARG00000001757 Ovis aries ENSOARG00000001757 I 0.692
FOXS1 Oryctolagus cuniculus ENSOCUG00000021480 I 0.692
FOXS1 Macaca mulatta ENSMMUG00000000969 I 0.692
FOXS1 Cavia porcellus ENSCPOG00000025295 I 0.692
FOXS1 Tursiops truncatus ENSTTRG00000007930 I 0.692
FOXS1 Callithrix jacchus ENSCJAG00000023288 I 0.692
ENSBTAP00000012128-D1 Bos grunniens ENSBTAP00000012128-D1 I 0.692
FOXS1 Monodelphis domestica ENSMODG00000019485 I 0.689
ENSMEUG00000005856 Macropus eugenii ENSMEUG00000005856 I 0.689
ENSSHAG00000012946 Sarcophilus harrisii ENSSHAG00000012946 I 0.689
ENSNLEG00000009700 Nomascus leucogenys ENSNLEG00000009700 I 0.687
ENSONIG00000017618 Oreochromis niloticus ENSONIG00000017618 I 0.686
FOXI1 Procavia capensis ENSPCAG00000006657 I 0.686
ENSPPYG00000016029 Pongo abelii ENSPPYG00000016029 I 0.686
ENSOARG00000003151 Ovis aries ENSOARG00000003151 I 0.686
ENSPANG00000013256 Papio anubis ENSPANG00000013256 I 0.686
ENSPFOG00000015741 Poecilia formosa ENSPFOG00000015741 I 0.686
FOXI1 Oryctolagus cuniculus ENSOCUG00000000836 I 0.686
ENSSHAG00000018578 Sarcophilus harrisii ENSSHAG00000018578 I 0.686
Gfo_R011197 Geospiza fortis Gfo_R011197 I 0.686
ENSP00000304286 Macaca fascicularis ENSP00000304286 I 0.686
ENSBTAP00000050534-D2 Bos grunniens ENSBTAP00000050534-D2 I 0.686
ENSXMAG00000010462 Xiphophorus maculatus ENSXMAG00000010462 I 0.686
Myotis_brandtii_FOXI1_10007902 Myotis brandtii Myotis_brandtii_FOXI1_10007902 I 0.686
Ogr15673 Ophisaurus gracilis Ogr15673 I 0.686
foxi1.L Xenopus laevis XB-GENE-494129 I 0.686
foxi1 Xenopus tropicalis XB-GENE-494125 I 0.686
Pvit_09672 Pogona vitticeps Pvit_09672 I 0.686
FOXI1 Tursiops truncatus ENSTTRG00000002178 I 0.686
foxi3a Takifugu rubripes ENSTRUG00000007060 I 0.686
ENSNLEG00000005109 Nomascus leucogenys ENSNLEG00000005109 I 0.686
Foxi1 Rattus norvegicus ENSRNOG00000006293 I 0.686
FOXI1 Pteropus vampyrus ENSPVAG00000005974 I 0.686
FOXI1 Sus scrofa ENSSSCG00000017009 I 0.686
ENSSTOG00000016524 Ictidomys tridecemlineatus ENSSTOG00000016524 I 0.686
foxi3a Tetraodon nigroviridis ENSTNIG00000017058 I 0.686
FOXI1 Taeniopygia guttata ENSTGUG00000001568 I 0.686
FOXI1 Tupaia belangeri ENSTBEG00000000162 I 0.686
FOXI1 Pan troglodytes ENSPTRG00000017514 I 0.686
FOXI1 Otolemur garnettii ENSOGAG00000032689 I 0.686
FOXI1 Felis catus ENSFCAG00000000835 I 0.686
ENSFALG00000009556 Ficedula albicollis ENSFALG00000009556 I 0.686
FOXI1 Homo sapiens ENSG00000168269 D 0.686
foxi3a Gasterosteus aculeatus ENSGACG00000018474 I 0.686
ENSGMOG00000001944 Gadus morhua ENSGMOG00000001944 I 0.686
FOXI1 Gorilla gorilla ENSGGOG00000015780 I 0.686
ENSECAG00000006873 Equus caballus ENSECAG00000006873 I 0.686
FOXI1 Dasypus novemcinctus ENSDNOG00000007480 I 0.686
ENSAMEG00000001516 Ailuropoda melanoleuca ENSAMEG00000001516 I 0.686
FOXI1 Anolis carolinensis ENSACAG00000015950 I 0.686
ENSAMXG00000008393 Astyanax mexicanus ENSAMXG00000008393 I 0.686
FOXI1 Bos taurus ENSBTAG00000014620 I 0.686
FOXI1 Callithrix jacchus ENSCJAG00000011646 I 0.686
FOXI1 Canis familiaris ENSCAFG00000016968 I 0.686
ENSLACG00000017904 Latimeria chalumnae ENSLACG00000017904 I 0.686
ENSCSAG00000010076 Chlorocebus sabaeus ENSCSAG00000010076 I 0.686
FOXI1 Monodelphis domestica ENSMODG00000006890 I 0.686
FOXI1 Microcebus murinus ENSMICG00000012575 I 0.686
FOXI1 Myotis lucifugus ENSMLUG00000027832 I 0.686
ENSMEUG00000000316 Macropus eugenii ENSMEUG00000000316 I 0.686
ENSMPUG00000012982 Mustela putorius furo ENSMPUG00000012982 I 0.686
FOXI1 Macaca mulatta ENSMMUG00000014124 I 0.686
Foxi1 Mus musculus ENSMUSG00000047861 D 0.686
FOXI1 Loxodonta africana ENSLAFG00000026591 I 0.686
ENSPMAG00000009377 Petromyzon marinus ENSPMAG00000009377 I 0.685
FOXL1 Sus scrofa ENSSSCG00000002658 I 0.681
foxl1 Oryzias latipes ENSORLG00000013881 I 0.681
Afo_R011902 Aptenodytes forsteri Afo_R011902 I 0.678
foxi3b Danio rerio ENSDARG00000009550 I 0.678
Brh_R008138 Buceros rhinoceros Brh_R008138 I 0.678
ENSAPLG00000012296 Anas platyrhynchos ENSAPLG00000012296 I 0.678
Tal_R009461 Tyto alba Tal_R009461 I 0.678
Cmyd_10020111 Chelonia mydas Cmyd_10020111 I 0.678
Alligator_sinensis_CCG016013.1 Alligator sinensis Alligator_sinensis_CCG016013.1 I 0.678
Aan_R013126 Calypte anna Aan_R013126 I 0.678
FOXI1 Gallus gallus ENSGALG00000002105 I 0.678
FOXI1 Meleagris gallopavo ENSMGAG00000002015 I 0.678
ENSPSIG00000009562 Pelodiscus sinensis ENSPSIG00000009562 I 0.678
ENSMEUG00000012884 Macropus eugenii ENSMEUG00000012884 I 0.677
Ogr02231 Ophisaurus gracilis Ogr02231 I 0.677
Pvit_14157 Pogona vitticeps Pvit_14157 I 0.677
NV17129 Nasonia vitripennis NV17129 I 0.676
ENSP00000365145 Macaca fascicularis ENSP00000365145 I 0.673
ENSGALG00000022935 Gallus gallus ENSGALG00000022935 I 0.671
Ogr17043 Ophisaurus gracilis Ogr17043 I 0.671
FOXI3 Taeniopygia guttata ENSTGUG00000010866 I 0.671
CapteG49410 Capitella teleta CapteG49410 I 0.671
FOXI3 Anolis carolinensis ENSACAG00000008418 I 0.671
ENSFALG00000010199 Ficedula albicollis ENSFALG00000010199 I 0.671
Pvit_14876 Pogona vitticeps Pvit_14876 I 0.671
SNAPOd2T00017674001 Oikopleura dioica SNAPOd2T00017674001 I 0.671
foxi4.1.L Xenopus laevis XB-GENE-5996119 I 0.669
ENSLACG00000001429 Latimeria chalumnae ENSLACG00000001429 I 0.669
CAD31849 Xenopus laevis CAD31849 I 0.669
fgenesh2_pg.scaffold_167000105 Branchiostoma floridae fgenesh2_pg.scaffold_167000105 I 0.669
ENSLACG00000015173 Latimeria chalumnae ENSLACG00000015173 I 0.669
HHAL002141-PA Halyomorpha halys HHAL002141-PA I 0.669
foxi4.1 Xenopus tropicalis XB-GENE-5996107 I 0.669
ENSPSIG00000009024 Pelodiscus sinensis ENSPSIG00000009024 I 0.669
ENSLOCG00000009392 Lepisosteus oculatus ENSLOCG00000009392 I 0.669
Cmyd_10016976 Chelonia mydas Cmyd_10016976 I 0.669
ENSBTAP00000008160-D1 Bos grunniens ENSBTAP00000008160-D1 I 0.669
FOXI2 Bos taurus ENSBTAG00000006218 I 0.669
FOXI2 Dasypus novemcinctus ENSDNOG00000046789 I 0.668
ENSCSAG00000004451 Chlorocebus sabaeus ENSCSAG00000004451 I 0.668
foxi3a Danio rerio ENSDARG00000055926 I 0.668
FOXL1 Anolis carolinensis ENSACAG00000000715 I 0.668
ENSPFOG00000023339 Poecilia formosa ENSPFOG00000023339 I 0.668
Cflo_03381--XP_001120632.1_APIME Camponotus floridanus Cflo_03381--XP_001120632.1_APIME I 0.668
FOXI2 Pteropus vampyrus ENSPVAG00000000088 I 0.668
FOXI2 Pan troglodytes ENSPTRG00000003052 I 0.668
MCOS_0000744701 Mesocestoides corti MCOS_0000744701 I 0.668
ENSPANG00000020235 Papio anubis ENSPANG00000020235 I 0.668
ENSNLEG00000000577 Nomascus leucogenys ENSNLEG00000000577 I 0.668
CJA14948 Caenorhabditis japonica CJA14948 I 0.667
MESCA005008 Megaselia scalaris MESCA005008 I 0.665
LDEC013670 Leptinotarsa decemlineata LDEC013670 I 0.665
TC008064 Tribolium castaneum TC008064 I 0.665
Myotis_brandtii_FOXI3_10004285 Myotis brandtii Myotis_brandtii_FOXI3_10004285 I 0.664
ECANG7_07925 Echinococcus canadensis ECANG7_07925 I 0.664
FOXI3 Myotis lucifugus ENSMLUG00000023270 I 0.664
FOXI1 Cavia porcellus ENSCPOG00000019611 I 0.664
KGM_09051 Danaus plexippus KGM_09051 I 0.664