CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30034418m.g
(
Saccoglossus kowalevskii
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Sakowv30034418m.g
T189408_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.838
0.826
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.759
0.814
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.759
0.814
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.748
0.744
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23951604_peptide
Forkhead
230
321
KPAYSYSCLIAMALKNSKTGCLPVSEIYHFMCENFPYFKTAPDGWKNSVRHNLSLNKCFEKIEKPPGGGSTRKGCLWALNPNKAAKMDDEIQ
23951605_peptide
Forkhead
230
321
KPAYSYSCLIAMALKNSKTGCLPVSEIYHFMCENFPYFKTAPDGWKNSVRHNLSLNKCFEKIEKPPGGGSTRKGCLWALNPNKAAKMDDEIQ
Links
Other
Forkhead
family TFs
Other
Saccoglossus kowalevskii
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy