LCUP016832 (Lucilia cuprina)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 LCUP016832 T189549_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW

WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.870 0.814
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW

WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.852 0.791
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV

BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.852 0.791
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW

WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.852 0.791
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW

WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.852 0.791
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW

WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.852 0.791
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD

HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.852 0.791
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD

HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.852 0.791
lin-31
M00665_2.00
Caenorhabditis elegans
NWRTAAAYANN

NNTRTTTAYWN
PBM
Narasimhan et al.(2015)
pTH9116
0.764 0.721
Foxa2
M00162_2.00
Mus musculus
GTAAAYAW

WTRTTTAC
PBM
Badis et al.(2009)
Foxa2_2830
0.686 0.698
FOXA2
M04815_2.00
Homo sapiens
NHVNRYMAATATTKACNNDN

NHNNGTMAATATTKRYNBDN
SELEX
Yin et al.(2017)
FOXA2_eDBD_HT-SELEX
0.686 0.698
Foxa2
M08121_2.00
Mus musculus
TRTTTACWYWDN

NHWRWGTAAAYA
ChIP-seq
Mathelier et al.(2014)
MA0047.2
0.686 0.698
FOXA2
M07959_2.00
Homo sapiens
NNWRWGYAAAYANNN

NNNTRTTTRCWYWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA2_HudsonAlpha
0.686 0.698
FOXA2
M09088_2.00
Homo sapiens
NHWRWGTAAACA

TGTTTACWYWDN
Misc
Kulakovskiy et al.(2013)
FOXA2_HUMAN.H11MO.0.A
0.686 0.698
Foxa2
M09104_2.00
Mus musculus
BNHTRTTKACWYW

WRWGTMAAYADNV
Misc
Kulakovskiy et al.(2013)
FOXA2_MOUSE.H11MO.0.A
0.686 0.698
FOXA2
M09542_2.00
Homo sapiens
WVWGTMAACANV

BNTGTTKACWBW
Misc
Heinz et al.(2010)
Liver-Foxa2_GSE25694
0.686 0.698
FOXA2
M10540_2.00
Homo sapiens
WAARYAAAYADKNMV

BKNMHTRTTTRYTTW
Transfac
Matys et al.(2006)
V$HNF3B_01
0.686 0.698
FOXA2
M10541_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3B_Q6
0.686 0.698
AAA20679
M10575_2.00
Xenopus laevis
WNWGTMAACAWWMW

WKWWTGTTKACWNW
Transfac
Matys et al.(2006)
V$XFD3_01
0.686 0.698
FOXA2
M04816_2.00
Homo sapiens
NWRNRYMAATATTKACWNWN

NWNWGTMAATATTKRYNYWN
SELEX
Yin et al.(2017)
FOXA2_eDBD_Methyl-HT-SELEX
0.686 0.698
fkh
M03734_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW

WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fkh_1
0.675 0.663
fkh
M03735_2.00
Drosophila melanogaster
HWASAATAAYAWT

AATRTTATTSTWD
SELEX
Nitta et al.(2015)
fkh_2
0.675 0.663
fkh
M06473_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
B1H
Mathelier et al.(2014)
MA0446.1
0.675 0.663
fkh
M06194_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
B1H
Zhu et al.(2011)
fkh_NAR_FBgn0000659
0.675 0.663
fkh
M08200_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
ChIP-seq
Contrino et al.(2012)
Mf15
0.675 0.663
fkh
M09668_2.00
Drosophila melanogaster
TRTTTRCAHAAG

CTTDTGYAAAYA
Misc
Kulakovskiy et al.(2009)
fkh
0.675 0.663
Q2L6N7_PELSI
M01990_2.00
Trionyx sinensis
KTRTTTACA

TGTAAAYAM
PBM
Weirauch et al.(2014)
pTH5334
0.667 0.640
FOXA1
M04817_2.00
Homo sapiens
NTRTKTACMYWN

NWRKGTAMAYAN
SELEX
Yin et al.(2017)
FOXA1_eDBD_HT-SELEX
0.667 0.674
FOXA1
M04819_2.00
Homo sapiens
BVYTAWGTAAACAAWN

NWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_1
0.667 0.674
FOXA1
M04820_2.00
Homo sapiens
HWRWRYAAATATTKACWYWR

YWRWGTMAATATTTRYWYWD
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_2
0.667 0.674
FOXA1
M08117_2.00
Homo sapiens
NNNNTRTTTACWYWD

HWRWGTAAAYANNNN
ChIP-seq
Mathelier et al.(2014)
MA0148.3
0.667 0.674
FOXA1
M07960_2.00
Homo sapiens
NNYWRWGYAAACANN

NNTGTTTRCWYWRNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_FOXA1_HudsonAlpha
0.667 0.674
FOXA1
M07961_2.00
Homo sapiens
HWRWGTAAAYA

TRTTTACWYWD
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA1_HudsonAlpha
0.667 0.674
FOXA1
M07962_2.00
Homo sapiens
NWVWGTAAACA

TGTTTACWBWN
ChIP-seq
Gerstein et al.(2012)
T-47D_FOXA1_HudsonAlpha
0.667 0.674
FOXA1
M08199_2.00
Homo sapiens
BWRDGTAAACANN

NNTGTTTACHYWV
ChIP-seq
Contrino et al.(2012)
Mv69
0.667 0.674
FOXA1
M08028_2.00
Homo sapiens
WRWRYAAAYA

TRTTTRYWYW
ChIP-seq
Chen et al.(2011)
GSE15244_FoxA1
0.667 0.674
FOXA1
M09090_2.00
Homo sapiens
VHWRWGTAAACA

TGTTTACWYWDB
Misc
Kulakovskiy et al.(2013)
FOXA1_HUMAN.H11MO.0.A
0.667 0.674
Foxa1
M09103_2.00
Mus musculus
TRTTKACWYW

WRWGTMAAYA
Misc
Kulakovskiy et al.(2013)
FOXA1_MOUSE.H11MO.0.A
0.667 0.674
FOXA1
M09544_2.00
Homo sapiens
WGCCAARRYAAAYANN

NNTRTTTRYYTTGGCW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_2
0.667 0.674
FOXA1
M09543_2.00
Homo sapiens
WRWGTAAACA

TGTTTACWYW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_1
0.667 0.674
FOXA1
M09545_2.00
Homo sapiens
WRWGTAAAYA

TRTTTACWYW
Misc
Heinz et al.(2010)
MCF7-FOXA1_GSE26831
0.667 0.674
FOXA1
M10542_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_02
0.667 0.674
FOXA1
M10543_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_03
0.667 0.674
FOXA1
M10544_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_01
0.667 0.674
FOXA1
M10545_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3ALPHA_Q6
0.667 0.674
FOXA1
M10546_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_Q6
0.667 0.674
FOXA1
M04818_2.00
Homo sapiens
NWRDGYMAAYAW

WTRTTKRCHYWN
SELEX
Yin et al.(2017)
FOXA1_eDBD_Methyl-HT-SELEX
0.667 0.674
FOXA1
M04821_2.00
Homo sapiens
BVYTAWGTAAACAAWV

BWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_1
0.667 0.674
FOXA1
M04822_2.00
Homo sapiens
YTRWRYAAATATTTACWYAR

YTRWGTAAATATTTRYWYAR
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_2
0.667 0.674
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP016832-PA Forkhead 13 102

Links

Other Forkhead family TFs
Other Lucilia cuprina TFs

428 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PMAA_083210 Penicillium marneffei PMAA_083210 N 0.000
PV06_01730 Exophiala oligosperma PV06_01730 N 0.000
PV05_06244 Exophiala xenobiotica PV05_06244 N 0.000
PV04_04302 Capronia semiimmersa PV04_04302 N 0.000
PMAA_083210 Talaromyces marneffei PMAA_083210 N 0.000
PITC_015930 Penicillium italicum PITC_015930 N 0.000
PEX1_088910 Penicillium expansum PEX1_088910 N 0.000
PDIP_53700 Penicillium digitatum PDIP_53700 N 0.000
PCH_Pc22g13920 Penicillium rubens PCH_Pc22g13920 N 0.000
PABG_04038 Paracoccidioides brasiliensis PABG_04038 N 0.000
PAAG_04257 Paracoccidioides sp lutzii PAAG_04257 N 0.000
OIDMADRAFT_62029 Oidiodendron maius OIDMADRAFT_62029 N 0.000
OCS_04198 Ophiocordyceps sinensis OCS_04198 N 0.000
PV07_05162 Cladophialophora immunda PV07_05162 N 0.000
PV10_06622 Exophiala mesophila PV10_06622 N 0.000
PVAR5_6035 Byssochlamys spectabilis PVAR5_6035 N 0.000
Pc22g13920 Penicillium chrysogenum Pc22g13920 N 0.000
gw1.6.206.1 Nectria haematococca gw1.6.206.1 N 0.000
Z519_06369 Cladophialophora bantiana Z519_06369 N 0.000
Z518_00296 Rhinocladiella mackenziei Z518_00296 N 0.000
Z517_06288 Fonsecaea pedrosoi Z517_06288 N 0.000
YALI0_E11693g Yarrowia lipolytica YALI0_E11693g N 0.000
X797_009049 Metarhizium robertsii X797_009049 N 0.000
UREG_03844 Uncinocarpus reesii UREG_03844 N 0.000
U727_00430291271 Penicillium solitum U727_00430291271 N 0.000
TRV_06765 Trichophyton verrucosum TRV_06765 N 0.000
TESG_00611 Trichophyton tonsurans TESG_00611 N 0.000
TEQG_03505 Trichophyton equinum TEQG_03505 N 0.000
NechaG2073 Fusarium solani NechaG2073 N 0.000
MGU_00835 Metarhizium guizhouense MGU_00835 N 0.000
MGG_05959 Magnaporthe oryzae MGG_05959 N 0.000
CTHT_0024920 Chaetomium thermophilum CTHT_0024920 N 0.000
CPC735_030630 Coccidioides posadasii CPC735_030630 N 0.000
CH063_02927 Colletotrichum higginsianum CH063_02927 N 0.000
CFIO01_13419 Colletotrichum fioriniae CFIO01_13419 N 0.000
ACLA_001220 Aspergillus clavatus CADACLAG00000242 N 0.000
BGHDH14_bgh05226 Blumeria graminis BGHDH14_bgh05226 N 0.000
ARB_06811 Arthroderma benhamiae ARB_06811 N 0.000
A1O9_12373 Exophiala aquamarina A1O9_12373 N 0.000
A1O7_04910 Cladophialophora yegresii A1O7_04910 N 0.000
A1O5_07132 Cladophialophora psammophila A1O5_07132 N 0.000
A1O1_02377 Capronia coronata A1O1_02377 N 0.000
MCYG_01797 Microsporum canis MCYG_01797 N 0.000
EPUS_03856 Endocarpon pusillum EPUS_03856 N 0.000
EV44_g1293 Erysiphe necator EV44_g1293 N 0.000
G647_03750 Cladophialophora carrionii G647_03750 N 0.000
MCYG_01797 Arthroderma otae MCYG_01797 N 0.000
MBR_00701 Metarhizium brunneum MBR_00701 N 0.000
MANI_009173 Metarhizium anisopliae MANI_009173 N 0.000
MAM_06483 Metarhizium album MAM_06483 N 0.000
MAJ_09186 Metarhizium majus MAJ_09186 N 0.000
MAC_06055 Metarhizium acridum MAC_06055 N 0.000
M7I_6904 Glarea lozoyensis M7I_6904 N 0.000
HMPREF1120_02332 Exophiala dermatitidis HMPREF1120_02332 N 0.000
HCBG_06549 Histoplasma capsulatum HCBG_06549 N 0.000
H105_01327 Trichophyton soudanense H105_01327 N 0.000
H102_01311 Trichophyton rubrum H102_01311 N 0.000
H101_05244 Trichophyton interdigitale H101_05244 N 0.000
CIMG_06601 Coccidioides immitis CIMG_06601 N 0.000