CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00012792001
(
Oikopleura dioica
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
SNAPOd2T00012792001
T189648_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.677
0.933
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.677
0.933
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.668
0.920
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.668
0.920
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00012792001
Forkhead
1
79
MAIQSSPMKKLTLSEIYQFLQNKFEFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSF
Links
Other
Forkhead
family TFs
Other
Oikopleura dioica
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy