CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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foxn4.S
(
Xenopus laevis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
XB-GENE-981090
T189750_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.845
0.919
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.806
0.895
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.806
0.884
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.786
0.733
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI42563
Forkhead
190
280
KPIYSYSCLIAMALKNSKTGSLPVSEIYSFMKDHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKLSGSSRKGCLWALNPAKIDKMEEEMQ
CAJ38821
Forkhead
190
280
KPIYSYSCLIAMALKNSKTGSLPVSEIYSFMKDHFLYFKTAPDGWKNSVRHNLSLNKCFEKVENRLSGSSRKGCLWALNPAKIDKMEEEMQ
Links
Other
Forkhead
family TFs
Other
Xenopus laevis
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy