CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACRE_059520
(
Acremonium chrysogenum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
ACRE_059520
T191623_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN
NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.856
0.971
nit-2
M10601_2.00
Neurospora crassa
DHGATA
TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.856
0.971
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS
STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.833
0.629
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD
HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.833
0.629
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD
HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.833
0.629
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG
CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.833
0.629
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFH43294
GATA
685
719
CTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGVV
Links
Other
GATA
family TFs
Other
Acremonium chrysogenum
TFs
436 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCP24
Arabidopsis lyrata
fgenesh2_kg.1__3195__AT1G30210.2
D
0.000
TCP24
Arabidopsis thaliana
AT1G30210
D
0.000
Bostr.15697s0315
Boechera stricta
Bostr.15697s0315
I
0.000
Bo6g107240
Brassica oleracea
Bo6g107240
I
0.000
Bra032365
Brassica rapa
Bra032365
I
0.000
Cla020670
Citrullus lanatus
Cla020670
I
0.000
Ciclev10007109m.g
Citrus clementina
Ciclev10007109m.g
I
0.000
Ciclev10012612m.g
Citrus clementina
Ciclev10012612m.g
I
0.000
orange1.1g047495m.g
Citrus sinensis
orange1.1g047495m.g
I
0.000
Eucgr.G02354
Eucalyptus grandis
Eucgr.G02354
I
0.000
Thhalv10008175m.g
Eutrema salsugineum
Thhalv10008175m.g
I
0.000
Thhalv10018773m.g
Eutrema salsugineum
Thhalv10018773m.g
I
0.000
gene10333-v1.0-hybrid
Fragaria vesca
gene10333-v1.0-hybrid
I
0.000
Lus10017856.g
Linum usitatissimum
Lus10017856.g
I
0.000
Lus10042962.g
Linum usitatissimum
Lus10042962.g
I
0.000
Lus10038512.g
Linum usitatissimum
Lus10038512.g
I
0.000
chr3.CM0282.560.nc
Lotus japonicus
chr3.CM0282.560.nc
I
0.000
MTR_7g015010
Medicago truncatula
MTR_7g015010
I
0.000
mgf014960m
Mimulus guttatus
mgf014960m
I
0.000
mgf025386m
Mimulus guttatus
mgf025386m
I
0.000
OBART07G03380
Oryza barthii
OBART07G03380
I
0.000
ORGLA07G0028600
Oryza glaberrima
ORGLA07G0028600
I
0.000
OGLUM07G02670
Oryza glumaepatula
OGLUM07G02670
I
0.000
OGLUM02G33090
Oryza glumaepatula
OGLUM02G33090
I
0.000
BGIOSGA025162
Oryza indica
BGIOSGA025162
I
0.000
ONIVA07G01330
Oryza nivara
ONIVA07G01330
I
0.000
ORUFI07G03030
Oryza rufipogon
ORUFI07G03030
I
0.000
ORUFI02G34160
Oryza rufipogon
ORUFI02G34160
I
0.000
OS07G0152000
Oryza sativa
OS07G0152000
I
0.000
Solyc02g089830.1
Solanum lycopersicum
Solyc02g089830.1
I
0.000
PGSC0003DMG400010045
Solanum tuberosum
PGSC0003DMG400010045
I
0.000
BRC1
Vitis vinifera
VIT_17s0000g04180
I
0.000