CJA06376 (Caenorhabditis japonica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 CJA06376 T192265_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS

STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.845 0.706
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD

HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.845 0.706
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD

HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.845 0.706
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG

CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.845 0.706
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN

NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.828 0.618
nit-2
M10601_2.00
Neurospora crassa
DHGATA

TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.828 0.618
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA06376 GATA 252 285

Links

Other GATA family TFs
Other Caenorhabditis japonica TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00022p00176280 Amborella trichopoda AMTR_s00022p00176280 N 0.000
Bo3g154060 Brassica oleracea Bo3g154060 N 0.000
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.000
OB03G46840 Oryza brachyantha OB03G46840 N 0.000
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.000
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.000
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.000