CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_42893
(
Aegilops tauschii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
F775_42893
T193197_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA19
M06893_2.00
Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV
Dap-seq
OMalley et al.(2016)
GATA19_col_a
0.862
0.944
GATA19
M06894_2.00
Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND
Dap-seq
OMalley et al.(2016)
GATA19_colamp_a
0.862
0.944
GATA20
M06884_2.00
Arabidopsis thaliana
GATCBGAT
ATCVGATC
Dap-seq
OMalley et al.(2016)
GATA20_col_a
0.820
0.889
GATA20
M06885_2.00
Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND
Dap-seq
OMalley et al.(2016)
GATA20_colamp_a
0.820
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT30484
GATA
114
149
CANCGTASTPLWRNGPRGPKSLCNACGIRFKKEERR
Links
Other
GATA
family TFs
Other
Aegilops tauschii
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy