GATA17 (Arabidopsis lyrata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 fgenesh2_kg.3__1856__AT3G16870.1 T193287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATA16
M06897_2.00
Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG

CATSATCATCATCATSATCATCATCAT
Dap-seq
OMalley et al.(2016)
GATA16_col_a
0.823 0.778
GATA15
M01997_2.00
Arabidopsis thaliana
NNHGATCNN

NNGATCDNN
PBM
Weirauch et al.(2014)
pTH7662
0.803 0.778
GATA15
M06886_2.00
Arabidopsis thaliana
GATGATGATGATGATGATS

SATCATCATCATCATCATC
Dap-seq
OMalley et al.(2016)
GATA15_col_b
0.803 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__1856__AT3G16870.1 GATA 43 78

Links

Other GATA family TFs
Other Arabidopsis lyrata TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_188638 Agaricus bisporus AGABI2DRAFT_188638 N 0.000
M378DRAFT_156363 Amanita muscaria M378DRAFT_156363 N 0.000
BOTBODRAFT_37556 Botryobasidium botryosum BOTBODRAFT_37556 N 0.000
CERSUDRAFT_111079 Ceriporiopsis subvermispora CERSUDRAFT_111079 N 0.000
CC1G_01334 Coprinopsis cinerea CC1G_01334 N 0.000
L804_02037 Cryptococcus gattii L804_02037 N 0.000
CNA04270 Cryptococcus neoformans CNA04270 N 0.000
DICSQDRAFT_161203 Dichomitus squalens DICSQDRAFT_161203 N 0.000
FIBRA_08488 Fibroporia radiculosa FIBRA_08488 N 0.000
FOMPIDRAFT_1025562 Fomitopsis pinicola FOMPIDRAFT_1025562 N 0.000
GALMADRAFT_236555 Galerina marginata GALMADRAFT_236555 N 0.000
GLOTRDRAFT_70334 Gloeophyllum trabeum GLOTRDRAFT_70334 N 0.000
M413DRAFT_65005 Hebeloma cylindrosporum M413DRAFT_65005 N 0.000
fgenesh2_pg.C_scaffold_4000344 Heterobasidion annosum fgenesh2_pg.C_scaffold_4000344 N 0.000
HETIRDRAFT_237963 Heterobasidion irregulare HETIRDRAFT_237963 N 0.000
K443DRAFT_675725 Laccaria amethystina K443DRAFT_675725 N 0.000
LACBIDRAFT_311571 Laccaria bicolor LACBIDRAFT_311571 N 0.000
Moror_13892 Moniliophthora roreri Moror_13892 N 0.000
PAXRUDRAFT_129737 Paxillus rubicundulus PAXRUDRAFT_129737 N 0.000
PHACADRAFT_249698 Phanerochaete carnosa PHACADRAFT_249698 N 0.000
PHLGIDRAFT_81249 Phlebiopsis gigantea PHLGIDRAFT_81249 N 0.000
PILCRDRAFT_32440 Piloderma croceum PILCRDRAFT_32440 N 0.000
PIIN_05647 Piriformospora indica PIIN_05647 N 0.000
PISMIDRAFT_89773 Pisolithus microcarpus PISMIDRAFT_89773 N 0.000
M404DRAFT_124276 Pisolithus tinctorius M404DRAFT_124276 N 0.000
PLEOSDRAFT_27233 Pleurotus ostreatus PLEOSDRAFT_27233 N 0.000
SCHCODRAFT_255141 Schizophyllum commune SCHCODRAFT_255141 N 0.000
SCLCIDRAFT_1209153 Scleroderma citrinum SCLCIDRAFT_1209153 N 0.000
M408DRAFT_308571 Serendipita vermifera M408DRAFT_308571 N 0.000
M408DRAFT_74753 Serendipita vermifera M408DRAFT_74753 N 0.000
SERLA73DRAFT_177720 Serpula lacrymans SERLA73DRAFT_177720 N 0.000
CY34DRAFT_800204 Suillus luteus CY34DRAFT_800204 N 0.000
BN946_scf185015.g92 Trametes cinnabarina BN946_scf185015.g92 N 0.000