MTR_1g094930 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_1g094930 T194189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.867 0.972
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN

NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.848 0.944
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN

NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.847 0.833
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG

CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.847 0.833
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB

VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.847 0.833
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN

NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.847 0.806
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH

DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.847 0.806
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN

NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.843 0.833
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN

NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.843 0.833
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR

YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.843 0.833
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN

NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.843 0.833
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN

NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.832 0.806
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY

RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.832 0.806
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH

DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.823 0.806
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH

DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.823 0.806
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA

TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.819 0.778
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN

NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.819 0.750
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN

NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES62141 GATA 244 279
AES62142 GATA 149 184

Links

Other GATA family TFs
Other Medicago truncatula TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_Genewise1.C_11428 Cryphonectria parasitica estExt_Genewise1.C_11428 N 0.000
SAPIO_CDS7735 Scedosporium apiospermum SAPIO_CDS7735 N 0.000
S40288_01099 Stachybotrys chartarum S40288_01099 N 0.000
S40285_02077 Stachybotrys chlorohalonata S40285_02077 N 0.000
PODANS_7_6170 Podospora anserina PODANS_7_6170 N 0.000
PFICI_08120 Pestalotiopsis fici PFICI_08120 N 0.000
NEUTE1DRAFT_146466 Neurospora tetrasperma NEUTE1DRAFT_146466 N 0.000
NechaG104215 Fusarium solani NechaG104215 N 0.000
MYCTH_2304956 Myceliophthora thermophila MYCTH_2304956 N 0.000
SMAC_06697 Sordaria macrospora SMAC_06697 N 0.000
SPBR_01271 Sporothrix brasiliensis SPBR_01271 N 0.000
TRIATDRAFT_286890 Trichoderma atroviride TRIATDRAFT_286890 N 0.000
NCU00282 Neurospora crassa NCU00282 N 0.000
estExt_fgenesh1_pm.C_sca_3_chr4_2_00554 Nectria haematococca estExt_fgenesh1_pm.C_sca_3_chr4_2_00554 N 0.000
X797_007206 Metarhizium robertsii X797_007206 N 0.000
VHEMI02043 Torrubiella hemipterigena VHEMI02043 N 0.000
UV8b_2866 Ustilaginoidea virens UV8b_2866 N 0.000
UCREL1_2036 Eutypa lata UCREL1_2036 N 0.000
TRIVIDRAFT_207294 Trichoderma virens TRIVIDRAFT_207294 N 0.000
TRIREDRAFT_61476 Trichoderma reesei TRIREDRAFT_61476 N 0.000
MGU_06388 Metarhizium guizhouense MGU_06388 N 0.000
MGG_04674 Magnaporthe oryzae MGG_04674 N 0.000
MBR_00882 Metarhizium brunneum MBR_00882 N 0.000
F503_01458 Ophiostoma piceae uamh F503_01458 N 0.000
CSUB01_00944 Colletotrichum sublineola CSUB01_00944 N 0.000
CPUR_05518 Claviceps purpurea CPUR_05518 N 0.000
CMQ_3644 Grosmannia clavigera CMQ_3644 N 0.000
CHGG_03240 Chaetomium globosum CHGG_03240 N 0.000
CH063_06435 Colletotrichum higginsianum CH063_06435 N 0.000
CFIO01_09808 Colletotrichum fioriniae CFIO01_09808 N 0.000
CCM_01671 Cordyceps militaris CCM_01671 N 0.000
FFUJ_03284 Fusarium fujikuroi FFUJ_03284 N 0.000
FGRRES_06699 Fusarium graminearum FGRRES_06699 N 0.000
FOXG_02238 Fusarium oxysporum FOXG_02238 N 0.000
MANI_013924 Metarhizium anisopliae MANI_013924 N 0.000
MAM_02536 Metarhizium album MAM_02536 N 0.000
MAJ_06639 Metarhizium majus MAJ_06639 N 0.000
MAC_07167 Metarhizium acridum MAC_07167 N 0.000
HMPREF1624_03102 Sporothrix schenckii HMPREF1624_03102 N 0.000
GLRG_00071 Colletotrichum graminicola GLRG_00071 N 0.000
FVEG_05410 Fusarium verticillioides FVEG_05410 N 0.000
FPSE_01546 Fusarium pseudograminearum FPSE_01546 N 0.000
BBA_06001 Beauveria bassiana BBA_06001 N 0.000