PPA05888 (Pristionchus pacificus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 PPA05888 T194914_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG07341
M01230_2.00 		Caenorhabditis briggsae
HGATANNN
NNNTATCD		 PBM
Lambert et al.(2019)
pTH11455 		0.865 0.686
elt-3
M08128_2.00 		Caenorhabditis elegans
TGATAAVA
TBTTATCA		 ChIP-seq
Mathelier et al.(2014)
MA0542.1 		0.865 0.686
elt-3
M09557_2.00 		Caenorhabditis elegans
DDTGATAASA
TSTTATCAHH		 Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode 		0.865 0.686
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA05888 GATA 149 183

Links

Other GATA family TFs
Other Pristionchus pacificus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG07341 Caenorhabditis briggsae CBG07341 D 0.865
CRE22330 Caenorhabditis remanei CRE22330 I 0.865
elt-3 Caenorhabditis elegans WBGene00001251 D 0.865
CJA17630 Caenorhabditis japonica CJA17630 I 0.865
CBN16869 Caenorhabditis brenneri CBN16869 I 0.865
scaffold1020-EXSNAP2012.4 Pristionchus exspectatus scaffold1020-EXSNAP2012.4 I 0.856
scaffold161-EXSNAP2012.12 Pristionchus exspectatus scaffold161-EXSNAP2012.12 I 0.856
Ppa-elt-3 Pristionchus pacificus PPA00209 I 0.856
Hba_00399 Heterorhabditis bacteriophora Hba_00399 I 0.855
HCOI01260600 Haemonchus contortus HCOI01260600 I 0.850
HCOI00225500 Haemonchus contortus HCOI00225500 I 0.850
BXY_0111400 Bursaphelenchus xylophilus BXY_0111400 I 0.850
OESDEN_22429 Oesophagostomum dentatum OESDEN_22429 I 0.824
OESDEN_01952 Oesophagostomum dentatum OESDEN_01952 I 0.824
ACOC_0000090001 Angiostrongylus costaricensis ACOC_0000090001 I 0.824
ACAC_0000964201 Angiostrongylus cantonensis ACAC_0000964201 I 0.824
TELCIR_03216 Teladorsagia circumcincta TELCIR_03216 I 0.824
NBR_0002046501 Nippostrongylus brasiliensis NBR_0002046501 I 0.824
HPBE_0001898401 Heligmosomoides bakeri HPBE_0001898401 I 0.824
ANCDUO_24750 Ancylostoma duodenale ANCDUO_24750 I 0.824
HCOI00096800 Haemonchus contortus HCOI00096800 I 0.824
ANCDUO_15230 Ancylostoma duodenale ANCDUO_15230 I 0.824
ANCCAN_11157 Ancylostoma caninum ANCCAN_11157 I 0.824
DICVIV_08599 Dictyocaulus viviparus DICVIV_08599 I 0.824