CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si028169m.g
(
Setaria italica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Si028169m.g
T195216_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si028169m
GATA
341
376
CSHCHSPDTPQWRAGPDGPGTLCNACGIRYAANKLL
Links
Other
GATA
family TFs
Other
Setaria italica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ha01602
Panicum virgatum
Pavir.Ha01602
N
0.867
Pavir.Hb01505
Panicum virgatum
Pavir.Hb01505
N
0.867
Sb05g001890
Sorghum bicolor
Sb05g001890
N
0.865
Thhalv10010566m.g
Eutrema salsugineum
Thhalv10010566m.g
N
0.805
SapurV1A.0465s0200
Salix purpurea
SapurV1A.0465s0200
N
0.805