TC010405 (Tribolium castaneum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 TC010405 T195384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS

STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.836 0.686
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD

HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.836 0.686
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD

HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.836 0.686
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG

CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.836 0.686
nit-2
M02017_2.00
Neurospora crassa
NNGATHNN

NNDATCNN
PBM
Weirauch et al.(2014)
pTH8624
0.823 0.714
nit-2
M10601_2.00
Neurospora crassa
DHGATA

TATCDH
Transfac
Matys et al.(2006)
F$NIT2_01
0.823 0.714
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC010405-PA GATA 336 370

Links

Other GATA family TFs
Other Tribolium castaneum TFs

439 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGL91 Arabidopsis thaliana AT3G66656 D 0.000
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.000
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.000
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.000
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.000
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.000
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.000
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.000
29693.m002039 Ricinus communis 29693.m002039 I 0.000
Pm030655 Prunus mume Pm030655 I 0.000
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.000
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.000
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.000
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.000
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.000
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.000
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.000
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.000
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.000
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.000
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.000
Ca_24185 Cicer arietinum Ca_24185 I 0.000
Ca_05023 Cicer arietinum Ca_05023 I 0.000
TCM_029518 Theobroma cacao TCM_029518 I 0.000
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.000
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.000
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.000
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.000
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.000
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.000
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.000
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.000
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.000
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.000
AGL29 Arabidopsis thaliana AT2G34440 I 0.000
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.000
Bo4g182590 Brassica oleracea Bo4g182590 I 0.000
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.000
Bra021910 Brassica rapa Bra021910 I 0.000
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.000
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.000
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.000
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.000
MDP0000274606 Malus domestica MDP0000274606 N 0.000
MDP0000120467 Malus domestica MDP0000120467 N 0.000
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.000
Cla019897 Citrullus lanatus Cla019897 N 0.000
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.000
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.000
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.000
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.000
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.000
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.000
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.000
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.000
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.000