CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UM05773
(
Ustilago maydis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
UM05773
T195602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.825
0.806
gtaJ
M01233_2.00
Dictyostelium discoideum
BAGATCKVNN
NNBMGATCTV
PBM
Lambert et al.(2019)
pTH5526
0.804
0.750
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
UM05773P0
GATA
327
362
CQACGTTETPEWRRGPDGARTLCNACGLHYAKLVRK
Links
Other
GATA
family TFs
Other
Ustilago maydis
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy