CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm020093
(
Prunus mume
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pm020093
T195960_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm020093
GATA
13
48
CTDCHTTKTPLWRGGPAGPRTLCNACGIKYRKRKRA
Links
Other
GATA
family TFs
Other
Prunus mume
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa013280mg
Prunus persica
PRUPE_ppa013280mg
N
0.867
GLYMA03G39220
Glycine max
GLYMA03G39220
N
0.851
GLYMA19G41780
Glycine max
GLYMA19G41780
N
0.851
LjSGA_064162.1
Lotus japonicus
LjSGA_064162.1
N
0.851
MTR_7g112330
Medicago truncatula
MTR_7g112330
N
0.840
Ca_01115
Cicer arietinum
Ca_01115
N
0.840