Ciclev10002056m.g (Citrus clementina)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Ciclev10002056m.g T196475_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10002056m GATA 201 238
Ciclev10002060m GATA 201 238
Ciclev10002131m GATA 201 238
Ciclev10002330m GATA 201 237

Links

Other GATA family TFs
Other Citrus clementina TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29596.m000720 Ricinus communis 29596.m000720 N 0.836
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.837
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.840
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.840
Ca_14968 Cicer arietinum Ca_14968 N 0.840
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.836
Cla022486 Citrullus lanatus Cla022486 N 0.809
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.809
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.836
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.840
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.836
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.836
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.826
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.840
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.840
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.867
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.867
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.867
GSMUA_Achr10G07970_001 Musa acuminata GSMUA_Achr10G07970_001 N 0.805
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.834
MDP0000303048 Malus domestica MDP0000303048 N 0.840
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.836
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.867
PDK_20s1363101g001 Phoenix dactylifera PDK_20s1363101g001 N 0.805
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.842
PK04210.1 Cannabis sativa PK04210.1 N 0.836
Pm004390 Prunus mume Pm004390 N 0.840
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.831
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.831
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.840
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.831
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.831
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.842
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.837
TCM_034530 Theobroma cacao TCM_034530 N 0.867
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.825
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.837