CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_235.6
(
Carica papaya
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
evm.TU.supercontig_235.6
T196546_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_235.6
GATA
200
237
CSNFKCSTTETPMWRRGPLGPKTLCNACGIKYRKDVEK
Links
Other
GATA
family TFs
Other
Carica papaya
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10038150.g
Linum usitatissimum
Lus10038150.g
N
0.816
orange1.1g047722m.g
Citrus sinensis
orange1.1g047722m.g
N
0.804
Gorai.009G070200
Gossypium raimondii
Gorai.009G070200
N
0.804
Ciclev10017490m.g
Citrus clementina
Ciclev10017490m.g
N
0.804