CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene24424-v1.0-hybrid
(
Fragaria vesca
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
gene24424-v1.0-hybrid
T196574_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24424.1-v1.0-hybrid
GATA
113
150
CTNINCRASQTPMWRTGPLGPKSLCNACGIRYRKLKLK
Links
Other
GATA
family TFs
Other
Fragaria vesca
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene24419-v1.0-hybrid
Fragaria vesca
gene24419-v1.0-hybrid
N
0.848
Pm028201
Prunus mume
Pm028201
N
0.817
MDP0000263391
Malus domestica
MDP0000263391
N
0.817
Cucsa.153540
Cucumis sativus
Cucsa.153540
N
0.815