CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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0300010106
(
Ostreococcus tauri
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
0300010106
T196991_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
0300010106
M02018_2.00
Ostreococcus tauri
NNNKATCN
NGATMNNN
PBM
Weirauch et al.(2014)
pTH7890
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.802
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02018_2.00
GATA
51
86
CDHCGALESPQWRRGPAAKPMLCNACGTRYRRTNNL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
0300010106
GATA
212
247
CDHCGALESPQWRRGPAAKPMLCNACGTRYRRTNNL
Links
Other
GATA
family TFs
Other
Ostreococcus tauri
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OSTLU_30438
Ostreococcus lucimarinus
OSTLU_30438
I
0.867
estExt_fgenesh2_pg.C_Chr_040222
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_040222
I
0.862
estExt_fgenesh1_pg.C_120215
Micromonas pusilla
estExt_fgenesh1_pg.C_120215
I
0.862
e_gw1.3.601.1
Ostreococcus RCC809
e_gw1.3.601.1
I
0.862
CHLREDRAFT_187360
Chlamydomonas reinhardtii
CHLREDRAFT_187360
I
0.851
fgenesh4_pg.C_scaffold_83000006
Volvox carteri
fgenesh4_pg.C_scaffold_83000006
I
0.838
fgenesh4_pg.C_scaffold_83000014
Volvox carteri
fgenesh4_pg.C_scaffold_83000014
I
0.838