CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc21g05640
(
Penicillium chrysogenum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pc21g05640
T197209_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sre
M01237_2.00
Neurospora crassa
NHGATHWN
NWDATCDN
PBM
Lambert et al.(2019)
pTH11832
0.854
0.855
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc21g05640.t1
GATA
94
128
CSNCGTKSTPLWRRSPTGAMICNACGLYLKARNVA
Pc21g05640.t1
GATA
238
271
CQNCGTTVTPLWRRDEQGHPICNACGLYYKLHGC
Links
Other
GATA
family TFs
Other
Penicillium chrysogenum
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy